Gene Information

Name : fliI (TOL2_C35830)
Accession : YP_006762444.1
Strain : Desulfobacula toluolica Tol2
Genome accession: NC_018645
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase FliI
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 4182621 - 4183955 bp
Length : 1335 bp
Strand : -
Note : -

DNA sequence :
ATGACCTTGGAACATTTAAACAAAATTGATTTTCATAAATACATGAAGGCTTTGGATCAATGCGTCACGATACGGCCGGA
GGGAAAGGTTTCCCAGGTTATCGGTCTTATTGCGGAAGGGGACAGCCTGGGATTGGGCATTGGGGCTTTGTGCAGTATTG
TTAATTCTAATGGCCTGGAAGTAAAAGCTGAGGTTGTTGGATTTAAAAAGGAAAAAGCCTTGTTTATGCCTTATGGAGAT
ATTCGGGGAATCAGTCTTGGCAGCAGGATCATTCCCATTTCAGCATCTTCGGTTGTGGGTGTTTCAGATCAACTGCTGGG
AAGAGTGGTCGATGGCATGGGAATCCCCATAGACGGTAAAGGAGAGATCAAGTACACTCAGGAATATGGCTTGTATGGAA
AACCCATAAGCCCTCTGGAAAGAGAACAGATTAAAGAACCTCTGGATGTGGGGGTAGCGGCAATCAACAGTATGATCACG
CTTGGTAAAGGTCAACGGGTAGCTATCATGGCAGGTTCCGGGGTGGGTAAAAGTGTTTTAATGGGAATGATGACCAAGCA
TACCAGTGCGGATGTGATCGTTATTGGTTTGATCGGTGAGCGGGGCAGGGAAGTGAAAGATTTTATTGAGGATACATTGG
GACAAGAAGGGATAAAAAGAGCTGTCGTGGTTGCGGCAACCTCTGATTCTCCTCCCCTGGTAAGGATGAGGGGTGCTTAT
CTTGCCACCACCATTGCTGAATATTTCAGGGACCGGGGTAAAAATGTATTGTTGATGGTGGATTCCATCACACGTTATGC
CATGTCTTCAAGAGATGTGGGGCTGGCTGCAGGCGAACCTCCGACATCCAAGGGGTATACCCCGTCATTTTTTGTGCAGA
TTCCGATCCTGCTCGAACGGGCTGGGAATATTAAAAACGGGGGATCAATTACAGGAATTTATACGGTTCTGGTTGAGGGT
GATGATTTAAATGATCCGGTTGGGGATACGGTTCGATCCATTGTTGACGGCCATATCGTCTTGTCCAGGGATCTTGCCAA
CCGGGGACATTATCCGGCCATTGATGTTCTTGCCAGTGTTTCAAGGGTCATGAGGGATGTCAGCCGAAAAGATCATGTGG
TTGTAAGGGATAAGGCGGTCAATGTTTTATCATCCTACAGGAGTGCGGAAGATATGATTACCATTGGTGCCTATGTGGAT
GGGTCTGACCCTGATATTGATGAGGCAAAACGCTTGATGCCGGGGATTATTCAATTTTTAAGGCAGGACATGACCAGGAA
AGTAGACATGCCGTCCAGTGTAAACGGTTTAAAAAAAGCCGTGGGAATAAAATAA

Protein sequence :
MTLEHLNKIDFHKYMKALDQCVTIRPEGKVSQVIGLIAEGDSLGLGIGALCSIVNSNGLEVKAEVVGFKKEKALFMPYGD
IRGISLGSRIIPISASSVVGVSDQLLGRVVDGMGIPIDGKGEIKYTQEYGLYGKPISPLEREQIKEPLDVGVAAINSMIT
LGKGQRVAIMAGSGVGKSVLMGMMTKHTSADVIVIGLIGERGREVKDFIEDTLGQEGIKRAVVVAATSDSPPLVRMRGAY
LATTIAEYFRDRGKNVLLMVDSITRYAMSSRDVGLAAGEPPTSKGYTPSFFVQIPILLERAGNIKNGGSITGIYTVLVEG
DDLNDPVGDTVRSIVDGHIVLSRDLANRGHYPAIDVLASVSRVMRDVSRKDHVVVRDKAVNVLSSYRSAEDMITIGAYVD
GSDPDIDEAKRLMPGIIQFLRQDMTRKVDMPSSVNGLKKAVGIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 9e-89 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-79 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 9e-79 47
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-79 47
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 9e-83 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 5e-79 47
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 3e-86 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 5e-87 47
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-86 47
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 9e-88 46
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 9e-88 46
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-87 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-79 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-79 46
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-87 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-76 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-76 46
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-83 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-83 46
escN AAC31513.1 L0034 Virulence LEE Protein 4e-79 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 4e-79 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 5e-79 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 5e-79 45
escN CAI43874.1 EscN protein Virulence LEE Protein 6e-80 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 8e-80 45
escN AAC38383.1 EscN Virulence LEE Protein 1e-78 45
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-78 45
escN AAK26715.1 EscN Virulence LEE Protein 3e-80 44
escN AAL57542.1 EscN Virulence LEE Protein 3e-80 44
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-80 44
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-80 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 5e-77 44
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-73 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-75 43
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 4e-74 43
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-70 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-70 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-75 41
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-75 41
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 3e-63 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-81 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_006762444.1 flagellum-specific ATP synthase FliI VFG2499 Protein 4e-93 50
fliI YP_006762444.1 flagellum-specific ATP synthase FliI VFG2331 Protein 6e-90 49
fliI YP_006762444.1 flagellum-specific ATP synthase FliI VFG1254 Protein 9e-101 48
fliI YP_006762444.1 flagellum-specific ATP synthase FliI VFG0048 Protein 3e-88 47
fliI YP_006762444.1 flagellum-specific ATP synthase FliI VFG0390 Protein 3e-87 47
fliI YP_006762444.1 flagellum-specific ATP synthase FliI VFG0515 Protein 6e-80 46
fliI YP_006762444.1 flagellum-specific ATP synthase FliI VFG0192 Protein 5e-90 45
fliI YP_006762444.1 flagellum-specific ATP synthase FliI VFG0812 Protein 2e-79 45
fliI YP_006762444.1 flagellum-specific ATP synthase FliI VFG0730 Protein 6e-79 45
fliI YP_006762444.1 flagellum-specific ATP synthase FliI VFG2144 Protein 3e-88 44
fliI YP_006762444.1 flagellum-specific ATP synthase FliI VFG1008 Protein 6e-65 42
fliI YP_006762444.1 flagellum-specific ATP synthase FliI VFG1778 Protein 1e-64 42