Gene Information

Name : fliP (TOL2_C35730)
Accession : YP_006762434.1
Strain : Desulfobacula toluolica Tol2
Genome accession: NC_018645
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein, protein export component FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4172289 - 4173041 bp
Length : 753 bp
Strand : -
Note : Signal peptide

DNA sequence :
ATGAACCGTAGAATGGTTTGCCTGATCTTTTTTTTTCTGGTCTGTGCTTTTGGGGAAGCCTATGCCGTGACATTTCCCAT
TCCCTCTTTGCAATTGAATGTTGAAACCGCTAAAACACCTGAAGAGGTTGCGGTTGTTCTTGAAATTATTGCTTTGCTCA
CGGTTCTTGCCCTTGCACCGGCTATTTTGATTTTGATGACTCCTTTTACACGTCTGATAGTTGTGTTTCATTTTTTGCGC
CAGGCCATTGGCACACAGTCCAGCCCTCCCAACCAGGTGATTGTGGGCCTGGCATTGTTTATGACGTTTTTTATCATCAA
GCCCGTGGCCCAGGAAATTTATCAGCAATCTTTAAATCCCTATCTTGAAAGAGAAATCACCTATGAGAAGGCTTTTGAAT
CAGCACAAGTTCCGATTCGAAAATTTTTGCTGCTCAATACCAGGGAAAGTGATATTGCTCTGTTTGTAAAAGGAGCGGAT
ATGAAAAAGCCTGAAACAAGAGATGACGTATCCTTGCTGGTGCTGATCCCGGCATATGTGATCAGTGAGTTAAAGACTGC
TTTTATCATCGGTTTTGTTCTCTACATCCCGTTTATTGTGATTGACATGGTGGTGGCGTCCGTTCTTCTGGCCATGGGAA
TGATGATGCTTCCCCCGGTTATGATTTCATTGCCGTTCAAGCTCATGCTGTTTGTGCTGGTGGATGGATGGCATTTGATT
TGTGCTTCCCTGTTAAAAAGTTTCGGAGTGTAA

Protein sequence :
MNRRMVCLIFFFLVCAFGEAYAVTFPIPSLQLNVETAKTPEEVAVVLEIIALLTVLALAPAILILMTPFTRLIVVFHFLR
QAIGTQSSPPNQVIVGLALFMTFFIIKPVAQEIYQQSLNPYLEREITYEKAFESAQVPIRKFLLLNTRESDIALFVKGAD
MKKPETRDDVSLLVLIPAYVISELKTAFIIGFVLYIPFIVIDMVVASVLLAMGMMMLPPVMISLPFKLMLFVLVDGWHLI
CASLLKSFGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 5e-34 44
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 5e-21 42
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 9e-25 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 9e-25 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 9e-25 42
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 1e-21 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 4e-26 42
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 2e-21 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 1e-21 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 3e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_006762434.1 flagellar biosynthesis protein, protein export component FliP VFG1259 Protein 2e-55 53
fliP YP_006762434.1 flagellar biosynthesis protein, protein export component FliP VFG2338 Protein 2e-50 52
fliP YP_006762434.1 flagellar biosynthesis protein, protein export component FliP VFG2494 Protein 1e-51 49
fliP YP_006762434.1 flagellar biosynthesis protein, protein export component FliP VFG2016 Protein 2e-52 46
fliP YP_006762434.1 flagellar biosynthesis protein, protein export component FliP VFG0394 Protein 3e-33 42
fliP YP_006762434.1 flagellar biosynthesis protein, protein export component FliP VFG0188 Protein 1e-32 41