Gene Information

Name : istB (TOL2_C03500)
Accession : YP_006759224.1
Strain : Desulfobacula toluolica Tol2
Genome accession: NC_018645
Putative virulence/resistance : Unknown
Product : IstB-like ATP binding protein IstB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 429409 - 430143 bp
Length : 735 bp
Strand : -
Note : -

DNA sequence :
ATGCCTGATTTAGAAAAGTATCTGTCCCACCTGAAATTACCCTATCTCCGGGATAATTATGAATCCGTTGCAACCATGGC
AGCACAGAAACAGTGGACCCACATAAAATATTTATCTGAACTTGTCAAACAGGAATCAAGGCTGCGCCGGGACAAAACAA
GACAGCGCCGAATCCGCATGGCAAAGTTCCCGGTGATCAAAACATTGGATCAGTTCAACTGGTCATGGCCCCGGAAAATA
AACCAGCCCCAGGTCCAGAATCTGTTCCGTCTTAAATTTATTGAACAAAAAAACAATATCGTTTTCATCGGCCCGGTGGG
TGTCGGCAAAACCCATATTGCAACGGCTTTAGGATATCAAGCATGCTTGAAAAGCCATACGGTTCTATTTGCTTCAGCTA
TAGATGTCGTGAATAATCTGGTGGCAGCCCAGCAGGCCGGTCAATTGAAACAGGAACTGAAAAAATACCTCAAACCAGCC
CTGCTCATCATGGACGAATTAGGTTATTTGCCCATCGACAAAATCGGTGCAGACCTTTTGTTCCAGATTATCAGTCAGCG
TTATGAACAAGGTGCCATGATCATCACTACAAACAGGGTGTTCAAGGACTGGCCCCAGATCTTCAATAATGACATGACAC
TGACATCAGCACTTCTGGATCGGCTCCTTCACCACACAGAGCCTGTCGTTATTGAAGGCAAAAGTTATAGAATGAGAGAC
GTGACAGAAGAATAA

Protein sequence :
MPDLEKYLSHLKLPYLRDNYESVATMAAQKQWTHIKYLSELVKQESRLRRDKTRQRRIRMAKFPVIKTLDQFNWSWPRKI
NQPQVQNLFRLKFIEQKNNIVFIGPVGVGKTHIATALGYQACLKSHTVLFASAIDVVNNLVAAQQAGQLKQELKKYLKPA
LLIMDELGYLPIDKIGADLLFQIISQRYEQGAMIITTNRVFKDWPQIFNNDMTLTSALLDRLLHHTEPVVIEGKSYRMRD
VTEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-37 47
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 5e-45 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-44 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-44 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-44 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-44 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-44 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-44 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-44 41
unnamed CAA21402.1 - Not tested HPI Protein 2e-44 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-44 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 2e-44 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 2e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istB YP_006759224.1 IstB-like ATP binding protein IstB VFG1460 Protein 1e-37 47
istB YP_006759224.1 IstB-like ATP binding protein IstB VFG1663 Protein 3e-45 42
istB YP_006759224.1 IstB-like ATP binding protein IstB VFG1515 Protein 8e-45 41
istB YP_006759224.1 IstB-like ATP binding protein IstB VFG1627 Protein 8e-45 41
istB YP_006759224.1 IstB-like ATP binding protein IstB VFG1606 Protein 8e-45 41