Gene Information

Name : TOL2_C29030 (TOL2_C29030)
Accession : YP_006761767.1
Strain : Desulfobacula toluolica Tol2
Genome accession: NC_018645
Putative virulence/resistance : Virulence
Product : two component system response regulator, OmpR family, related to CopR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3415777 - 3416448 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence :
ATGAGAATTCTTGTTGTTGAAGATGATAAAAAAATTGCTGAATTTGTCCAAAAGGGACTCAAATCATCAGGTTTTGCAGT
TGATCATGCCATAACAGGAAGCCAGGGGTTTGAAATGGGGTTTGATGAACCCTATGATGCCATGATTGTTGATATAATGC
TGCCGAAAATGGATGGCATCTCCTTGATAAAAAAGTTACGGGAACAAAAAAATAATACGCCTGTAATTATTTTGAGTGCC
AGGGACAGGGTGGATGACAGGGTGAATGGCCTTCAAGCCGGCGCTGATGATTATCTTACCAAACCCTTTGCTTTTTCAGA
ACTTCTTGCAAGGATACAGGCCCTTATCCGACGTGCCGGAAATATTGCGGATCCAGTGAATCTTTCCTATGCTGATTTAA
GCATTGATATCCTGAAGCGTCAGGTAAAACGAGATAACAAGCCCATAGAAGTTCAGCCTCTTGAGTTTTCTCTTCTTGAA
TATTTGCTGCGTAACAAGGAACGGGTGGTTTCAAAAACCATGATCATGGAACATGTCTGGAACTATAATTTTGATCCCAT
GACCAATGTTGTTGAAGCGCGAATCTGCAGGCTGAGAGATAAAATTGATAAAAACTTTGAACCCAAATTGATTCATACGG
TAAGAGGTGCGGGGTATGTACTCAAAGTTTAA

Protein sequence :
MRILVVEDDKKIAEFVQKGLKSSGFAVDHAITGSQGFEMGFDEPYDAMIVDIMLPKMDGISLIKKLREQKNNTPVIILSA
RDRVDDRVNGLQAGADDYLTKPFAFSELLARIQALIRRAGNIADPVNLSYADLSIDILKRQVKRDNKPIEVQPLEFSLLE
YLLRNKERVVSKTMIMEHVWNYNFDPMTNVVEARICRLRDKIDKNFEPKLIHTVRGAGYVLKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-45 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-44 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TOL2_C29030 YP_006761767.1 two component system response regulator, OmpR family, related to CopR BAC0125 Protein 1e-50 53
TOL2_C29030 YP_006761767.1 two component system response regulator, OmpR family, related to CopR BAC0083 Protein 7e-56 49
TOL2_C29030 YP_006761767.1 two component system response regulator, OmpR family, related to CopR BAC0638 Protein 1e-49 49
TOL2_C29030 YP_006761767.1 two component system response regulator, OmpR family, related to CopR BAC0308 Protein 9e-48 47
TOL2_C29030 YP_006761767.1 two component system response regulator, OmpR family, related to CopR BAC0197 Protein 4e-47 46
TOL2_C29030 YP_006761767.1 two component system response regulator, OmpR family, related to CopR BAC0111 Protein 4e-54 45
TOL2_C29030 YP_006761767.1 two component system response regulator, OmpR family, related to CopR BAC0347 Protein 1e-48 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TOL2_C29030 YP_006761767.1 two component system response regulator, OmpR family, related to CopR VFG0596 Protein 1e-45 46
TOL2_C29030 YP_006761767.1 two component system response regulator, OmpR family, related to CopR VFG1390 Protein 2e-48 42
TOL2_C29030 YP_006761767.1 two component system response regulator, OmpR family, related to CopR VFG1386 Protein 3e-43 42
TOL2_C29030 YP_006761767.1 two component system response regulator, OmpR family, related to CopR VFG1389 Protein 6e-40 42