Gene Information

Name : capL (TOL2_C23390)
Accession : YP_006761204.1
Strain : Desulfobacula toluolica Tol2
Genome accession: NC_018645
Putative virulence/resistance : Virulence
Product : biosynthesis protein of type I capsular polysaccharide, nucleotide sugar dehydrogenase CapL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2728071 - 2729360 bp
Length : 1290 bp
Strand : -
Note : -

DNA sequence : 
ATGGATAAAAACACAAAAATTGCGGTTATTGGTCTGGGTTATGTTGGATTACCACTGGCAGTTCATTTTGCTGCAAAATT
TCACACAATCGGTCTTGATCTAAAAGAAAGTATTATTGAAAACTGCAAAAAATTTGAAGATCCCACAGGTGAAGTGTCAA
AGGACGAGTTTGAAAAAGCAGCATATTTTTTTCCGACATCTGATCCATCCAAAATTTCAGATGCGGATTATATCATTGTT
GCAGTTCCAACTCCCATAGATACTGCACGACGTCCCGATTTGAAGTACATGGAAAGTTCATCTCAGACTGCTGGAAAATA
TATGAAAAAAGGTGCTGTTGTTATCTTTGAATCCACTGTTTATCCTGGTGTTACAGAAGAGATCTGCGTTCCTATACTGG
AAAAAGTATCCGGATACGAGTGGAAAAAGGATTTTCATGTGGGATATTCTCCAGAACGGATTAATCCGGGAGACAAGGAA
CACACCTTGCCAAAGATTGTAAAAGTTGTTTCAGGAGATGATGAAGAAACCTGTGATCGGGTGGCAATGCTTTATGAAAC
CATTATTGATGCAGGGGTTCACAGAACTCAAACCATAAAAGAAGCTGAGGCTGCCAAGGTAATTGAAAATACGCAAAGAG
ATTTGAATATTGCATTAATGAATGAACTGGCTCTTATTTTTGATAAATTTGGTATTGATACAAAAAACGTATTGGAAGCG
GCCGGTTCCAAATGGAATTTTCTTCCTTTCAAGCCAGGGCTTGTGGGCGGTCACTGCATTGGGGTTGATCCCTACTATCT
GACCTTTAAGGCGGAATCCGAAGGCTATCATCCACAGGTCATTTTATCGGGTCGAAGAATTAATGACAATATGGGACGGT
TTGTGGTTGAAAAAACTATTAAAATGATGATCAACCAGGGATTGAATGTCAAGGATTCAAAAATAGGGGTTCTGGGGCTT
ACCTTTAAGGAAGACTGTCCGGACCTGAGAAATACCAGGGTAGTTGATATCATTGAAGAACTTTGTTTATATGGAACCAA
TGTCCTGGTTCATGATGCAATTTCAGATCCCAAAGAGGCCCTGGCATATTATAATATAAATCAATGCGAATGGGATGAGC
TCAACGAACTCTCCGCTCTTATCCTTGCAGTACCCCATAAAGAATATTTGAAAAAAAATCTTTCAGAGTTGAAAAAGATG
CTTCTTCCGGACGGCTGCTTGATTGATGTAAAATCAGTGTTTGATCCACAAGAAGCAAAAAAAATGGGAATCAATTTCTG
GCGTTTGTAA

Protein sequence : 
MDKNTKIAVIGLGYVGLPLAVHFAAKFHTIGLDLKESIIENCKKFEDPTGEVSKDEFEKAAYFFPTSDPSKISDADYIIV
AVPTPIDTARRPDLKYMESSSQTAGKYMKKGAVVIFESTVYPGVTEEICVPILEKVSGYEWKKDFHVGYSPERINPGDKE
HTLPKIVKVVSGDDEETCDRVAMLYETIIDAGVHRTQTIKEAEAAKVIENTQRDLNIALMNELALIFDKFGIDTKNVLEA
AGSKWNFLPFKPGLVGGHCIGVDPYYLTFKAESEGYHPQVILSGRRINDNMGRFVVEKTIKMMINQGLNVKDSKIGVLGL
TFKEDCPDLRNTRVVDIIEELCLYGTNVLVHDAISDPKEALAYYNINQCEWDELNELSALILAVPHKEYLKKNLSELKKM
LLPDGCLIDVKSVFDPQEAKKMGINFWRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-102 54
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-89 49
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-89 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capL YP_006761204.1 biosynthesis protein of type I capsular polysaccharide, nucleotide sugar dehydrogenase CapL VFG0431 Protein 2e-89 49