Gene Information

Name : dnaB (TOL2_C22860)
Accession : YP_006761151.1
Strain : Desulfobacula toluolica Tol2
Genome accession: NC_018645
Putative virulence/resistance : Unknown
Product : replicative DNA helicase DnaB
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.1.-
Position : 2656696 - 2658075 bp
Length : 1380 bp
Strand : +
Note : -

DNA sequence :
GTGCCCATAAAAAATAAAATAGCCACAGACCCGCTTCTCAGCAGAACACCTCCCCATGACCTTGATGCGGAAGAATCCAT
ATTAAGCGCCATATTTATCAATAACAACAGTCTTCATGATATTATTGATATTCTATCTCCGGAGGACTTTTACAAAGGCG
CCCATAAAAAAATATTCAAGGTAATTATCGAGCTTGCCCTCAGGGAAGAACCTGCAGACCTTGTTACAGTTGCCAATCGG
CTCAAGGAAAAAGATGAACTTGAAAGTATTGGTGGTGCCGCCTATCTTGCAGCCATTTCCGATGCAGCCCCAATTGCTGT
AAATGCCGTCCATTATGCCAAAATCATTCATGGCAAGGCGTCTTTAAGACAAATGATCACGGCTGCTTCAGATATTATTG
AAAGATGTCTGAAAGACAAAGGTGATGTGGAAGAAATTATTGATTTTGCTGAAAGCTCGATCTTTAATATAGCAGAAAAA
AAATCAAAAAGTTCATTTCAAAGCCTGGGAGAGCTGATAAGTTTAAATATTGACAAACTTGAAGAGCAGCAGGGAAAAGA
CGGCGGATTATCAGGACTTTCCACAGGATATACAAAATTAAACAATATCACATCAGGACTGCAAAAATCCGATCTGATTA
TTCTGGCGGCAAGGCCCAGCATGGGAAAAACCGCTTTTGCCTTGAACATGGCCAGGAATGTTGCCGTTGAAGAACGCAAA
CCCGTTGCTGTTTTTTCTCTTGAAATGTCCAATGAGCAACTTTCCATGAGACTTTTGACATCCGAGGCCCGCATAGATTC
AAACAGGCTTCGAACCGGTTTTATCAACCAGGAAGACTGGCAAAACGCAACAGATGCGGCAGGCGTTTTAAATGACTTGC
CAATTTTCATAGATGATACGCCCAACATTACTGCAATGGAAATACGGGCAAAGGCAAGAAAGCTGTATCAAAAGCACAAT
GAAATCGGGCTGATTATTATAGATTACCTCCAGCTGATGAGGCCCCCGTTTAAAACAGATCGAAGAGACCTGGAAATTGC
AGAAATTTCAAGATCTTTAAAAGCTCTTGCCAAAGAACTTGAGGTGCCTATCATTGCTTTGTCCCAGCTGAACCGTATGC
TTGAACAACGCGCGGACAAACGTCCCATGCTGTCTGATCTTCGCGAGTCAGGCGCCCTTGAACAGGATGCGGATATTGTG
GCTTTCATTTACAGAGATGAGGTCTATAATAAGGAAGCAGACAATCCTAAAAAAGGTACTGCGGAAATCATTGTTGCCAA
AAACAGGAACGGTGCTACAGGCACAGCGTTCATGCATTTTATGGGTCAATACACCCGTTTTGAAGAACTTGCACCGGATT
CATATCAGGAATTTCAATGA

Protein sequence :
MPIKNKIATDPLLSRTPPHDLDAEESILSAIFINNNSLHDIIDILSPEDFYKGAHKKIFKVIIELALREEPADLVTVANR
LKEKDELESIGGAAYLAAISDAAPIAVNAVHYAKIIHGKASLRQMITAASDIIERCLKDKGDVEEIIDFAESSIFNIAEK
KSKSSFQSLGELISLNIDKLEEQQGKDGGLSGLSTGYTKLNNITSGLQKSDLIILAARPSMGKTAFALNMARNVAVEERK
PVAVFSLEMSNEQLSMRLLTSEARIDSNRLRTGFINQEDWQNATDAAGVLNDLPIFIDDTPNITAMEIRAKARKLYQKHN
EIGLIIIDYLQLMRPPFKTDRRDLEIAEISRSLKALAKELEVPIIALSQLNRMLEQRADKRPMLSDLRESGALEQDADIV
AFIYRDEVYNKEADNPKKGTAEIIVAKNRNGATGTAFMHFMGQYTRFEELAPDSYQEFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 5e-81 45
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 4e-81 45
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 8e-77 42
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-81 41
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 8e-75 41
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 6e-74 41
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 6e-74 41