Gene Information

Name : kdsB (TOL2_C12550)
Accession : YP_006760122.1
Strain : Desulfobacula toluolica Tol2
Genome accession: NC_018645
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase KdsB
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.38
Position : 1484265 - 1484990 bp
Length : 726 bp
Strand : -
Note : -

DNA sequence :
ATGACAATTGCGGTAATACCATCCAGATACGGTTCAAGCCGGTTTAAAGGCAAGCCTTTAGCGCTTGTGGCCGGCAAATC
CATGATTCAACGGGTGTATGAACAGGCACAAAAATCCCGAACGGTTTCAAAAACCATTGTGGCAACCGATGATGAAAGAA
TTTTCAATGCGGTTGAAGCATTTGGCGGACATGCAGTAATGACGTCCGAGGACTGCCGTTCCGGAACCGACAGGGTTGCC
CAGACAGCCGCCTTGCTGAATCTTGGGCCGGATGAGATCATTGTCAATATCCAGGGAGACCAGCCCGTGTTCAACCCCTT
GACCATTGATGAACTGATATCTCCCTTTGCCGATGATCCCGACCTTGTCATGTCCACCCTTGCATTCAAGATACAGGATG
AAAGGGAAATCACTGATCCCAAAGATGTAAAAGTCACCTTTGACCGGAACGGATTTGCCCTTTATTTTTCCCGGGCACAG
ATTCCCTATCCCAGGGATAAAGAAACACCAGCCGATTTTTACAAGCACCTGGGCTTTTATGCCTACAAAAAAAGTTTTCT
GGACAAACTGGTCACACTTCCCACAAGCCCTTGTGAGCATATTGAAAAGCTTGAACAATTAAGGGTGCTGGAATTCGGCT
TTCGGATCAAGGTGGTTATTACCCCATATGACTCCCCGGAAATTGACCTGCCGGAAGATATCAAACGGATTGAAGCCAAG
CTTTAA

Protein sequence :
MTIAVIPSRYGSSRFKGKPLALVAGKSMIQRVYEQAQKSRTVSKTIVATDDERIFNAVEAFGGHAVMTSEDCRSGTDRVA
QTAALLNLGPDEIIVNIQGDQPVFNPLTIDELISPFADDPDLVMSTLAFKIQDEREITDPKDVKVTFDRNGFALYFSRAQ
IPYPRDKETPADFYKHLGFYAYKKSFLDKLVTLPTSPCEHIEKLEQLRVLEFGFRIKVVITPYDSPEIDLPEDIKRIEAK
L

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-41 44
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-41 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-40 43