Name : kdsB (TOL2_C12550) Accession : YP_006760122.1 Strain : Desulfobacula toluolica Tol2 Genome accession: NC_018645 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase KdsB Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 1484265 - 1484990 bp Length : 726 bp Strand : - Note : - DNA sequence : ATGACAATTGCGGTAATACCATCCAGATACGGTTCAAGCCGGTTTAAAGGCAAGCCTTTAGCGCTTGTGGCCGGCAAATC CATGATTCAACGGGTGTATGAACAGGCACAAAAATCCCGAACGGTTTCAAAAACCATTGTGGCAACCGATGATGAAAGAA TTTTCAATGCGGTTGAAGCATTTGGCGGACATGCAGTAATGACGTCCGAGGACTGCCGTTCCGGAACCGACAGGGTTGCC CAGACAGCCGCCTTGCTGAATCTTGGGCCGGATGAGATCATTGTCAATATCCAGGGAGACCAGCCCGTGTTCAACCCCTT GACCATTGATGAACTGATATCTCCCTTTGCCGATGATCCCGACCTTGTCATGTCCACCCTTGCATTCAAGATACAGGATG AAAGGGAAATCACTGATCCCAAAGATGTAAAAGTCACCTTTGACCGGAACGGATTTGCCCTTTATTTTTCCCGGGCACAG ATTCCCTATCCCAGGGATAAAGAAACACCAGCCGATTTTTACAAGCACCTGGGCTTTTATGCCTACAAAAAAAGTTTTCT GGACAAACTGGTCACACTTCCCACAAGCCCTTGTGAGCATATTGAAAAGCTTGAACAATTAAGGGTGCTGGAATTCGGCT TTCGGATCAAGGTGGTTATTACCCCATATGACTCCCCGGAAATTGACCTGCCGGAAGATATCAAACGGATTGAAGCCAAG CTTTAA Protein sequence : MTIAVIPSRYGSSRFKGKPLALVAGKSMIQRVYEQAQKSRTVSKTIVATDDERIFNAVEAFGGHAVMTSEDCRSGTDRVA QTAALLNLGPDEIIVNIQGDQPVFNPLTIDELISPFADDPDLVMSTLAFKIQDEREITDPKDVKVTFDRNGFALYFSRAQ IPYPRDKETPADFYKHLGFYAYKKSFLDKLVTLPTSPCEHIEKLEQLRVLEFGFRIKVVITPYDSPEIDLPEDIKRIEAK L |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-41 | 44 |
kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 3e-41 | 44 |
kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-40 | 43 |