Gene Information

Name : HIMB59_00000910 (HIMB59_00000910)
Accession : YP_006757472.1
Strain : alpha proteobacterium HIMB59 HIMB59
Genome accession: NC_018644
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 83272 - 84435 bp
Length : 1164 bp
Strand : -
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence : 
TTGAAAATACTTGTTATAGGACTTGGTTATGTAGGTACAGCTAATGCTATCTTGCTGTCCCAACAAAATGAAGTTGTTTG
TTATGATCTTAACACCGATCGTATCAATCTAATTAATGATAAAATTTCTCCTATTGAAGATAAAGAAGCGTCTGAATATC
TTTATCAAAAAAAATTAAATCTTCGGGGTGTCTCTGAGTTTCCCTCTCAAGATGATTTTGATTTTGTTATTATCGCTACT
CCCACTAATTACGATCCTGATACCAATCATTTTGATACTTCAACTGTAGAGTCATGTATTGCGAGTGTGAATTCTCAAAA
TTCGAAAGCAACAATTGTCATTCGATCAACTCTTCCAGTAGGATTTGTTGAAAACGTTCAAAAAAAATATCGTAACCAAG
AAATTATATTTGTTCCTGAATTTTTACGGGAGGGTAGAGCGGTGCACGATAGTCTTTATCCATCTAGAATTGTTGTAGGT
TCGCATTCTGATCAAGCTAAAAAATTTGCTGAATTATTAGTTGAAGGAGCTACTAATAAAGAGGTTGAAGTCCTTTTTAC
TAAATCCACGGAAGCCGAGTCCTCGAAACTTTTTGCTAATGCTTTTTTAGCAATGCGGGTGACATTTTTTAATGAACTTG
ACTCTTTTGCTATGACAAGAAATCTTGATACAAAAGAGATAGTCAAAGCGGTGAGTCTCGATCCTCGAATAGGTGATTAT
TACAATAACCCTTCTTTTGGTTACGGTGGTTACTGCCTTCCAAAAGACACTAAACAACTGTTACGTAATTTTGATCAAGT
CCCTCAAAAAATCATGGAGGCCATTATCGACTCCAATACAATGCGAAAAGATTTTTTAGGTCTAGAAATAGCTAAATTAA
AGCCAAAAAAAGTGGGGGTTTTTAGACTGGCGATGAAAGAGGGCTCCGATAATATTCGTGAATCGAGCATGCAGGGTATT
ATGAAAAGAGTTAAAGCTAAAGGAATACCTATGATCATATATGAACCACTTATTAGGGAAGAAAGCTTTTTTAACTCACC
CGTCTATACAGACTTGCAGCAATTTAAAAAAGACTCAGATTTAATTCTTTGTAATCGTAACTCTTCTGAATTAAGTGACG
TTCAAGATAAAATCTTTACCCGAGATATATTTCAACAAGATTAA

Protein sequence : 
MKILVIGLGYVGTANAILLSQQNEVVCYDLNTDRINLINDKISPIEDKEASEYLYQKKLNLRGVSEFPSQDDFDFVIIAT
PTNYDPDTNHFDTSTVESCIASVNSQNSKATIVIRSTLPVGFVENVQKKYRNQEIIFVPEFLREGRAVHDSLYPSRIVVG
SHSDQAKKFAELLVEGATNKEVEVLFTKSTEAESSKLFANAFLAMRVTFFNELDSFAMTRNLDTKEIVKAVSLDPRIGDY
YNNPSFGYGGYCLPKDTKQLLRNFDQVPQKIMEAIIDSNTMRKDFLGLEIAKLKPKKVGVFRLAMKEGSDNIRESSMQGI
MKRVKAKGIPMIIYEPLIREESFFNSPVYTDLQQFKKDSDLILCNRNSSELSDVQDKIFTRDIFQQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-78 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HIMB59_00000910 YP_006757472.1 nucleotide sugar dehydrogenase VFG0963 Protein 4e-80 47