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Name : HIMB59_00006860 (HIMB59_00006860) Accession : YP_006758062.1 Strain : alpha proteobacterium HIMB59 HIMB59 Genome accession: NC_018644 Putative virulence/resistance : Unknown Product : D-xylose isomerase Function : - COG functional category : - COG ID : - EC number : 5.3.1.5 Position : 640876 - 642183 bp Length : 1308 bp Strand : + Note : PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase DNA sequence : ATGTCAGATTATTTTCAATCAATTCCAAAAATAAAGTTTGAGGGCAAAGATAGCCAAAATCCTTTAGCTTTTAAGTTTTA CAATCCGCAACAAAAGGTATTGGGAAAAACTATCGAGGATCATTTGAGAATGGCAGTATGTTATTGGCATACGTTTAATT GGCCTGGTAATGACCCTTTTGGAGGTCAAACATTTCTTAGACCTTGGATGGATCATCAAGATGCCATTGATCAAGCTACA GATAAATTGGAAAATGCCTTCTCTTTTTTTGATAAACTAGATATTCCTTATTTTTGTTTCCATGATGTTGATATTGCACC TGAGGGGAATAATTTTGCTGAGACTGAAATAATTCAAAAAAAAATAGTTGATTTAATTTCTAAAAAACTTGAAACCTCAA AAGTAAAATTACTATGGGGGACTGCTAATTTATTTAGTCACCGAAGATATATGGCTGGCGCAGCCACAAACCCTAACCCA GAAATTTTTCAATATGCTGCAGCACAGGTAAAAATGTGTATTGAGAATACTCATCACTTAGGAGGTCAAAATTATGTGCT TTGGGGAGGTCGTGAGGGTTATGAAACCATTTTGAATACCAACATGAAACAAGAGTTCGATCAATTGGGTCGCTTTCTTA ACATGGTAGCTGAACACAAACATAAAATTGGATTTCAAGGTAACCTTTTAATTGAACCTAAGCCTCATGAGCCTACTAAA CATCAATATGATTTTGACTCGGCTAACGTTTTTGCTTTTCTTCAAAAATACGGGTTGGAAAAAGAATTTAAACTTAATAT AGAAGTGAATCATGCCATTTTAGCCAAACACTCATTTGAACATGAGATCGCATATGCTTTAGCTAATGATATTTTTGGTA GCATTGATATTAATCGGGGCGATTATCTAGTTGGATGGGATACCGATCAGTTCCCTAATAATACCGAAGAACTTTTATTA CCTTTTTATTATCTTTTCAAAAACCAAGGACTTGGTAGTGGTGGCTTAAATATGGATGCTAAAATCAGACGTCAATCTAT AGATCCTGAAGATTTGTTTTATGCGCATATTGGAGCTATGGACACTTGTGCTAGAACACTATTAGCAGTTGAGAGAATGA TTAACGATGGTTCTTATGAAGAATTTTTGAATAAAAGATATGAAAATTGGTCTCAAAATAAAGAATTAATGCAATCTTCC TCATTGGAAAGTATCTACGAAAAGGTTAAATCAAAAGATATTAATCCTGAACCACAATCCGGTAGACAGGAATATCTTGA AAACTTGTTAAACTCTTTTATTGAATAA Protein sequence : MSDYFQSIPKIKFEGKDSQNPLAFKFYNPQQKVLGKTIEDHLRMAVCYWHTFNWPGNDPFGGQTFLRPWMDHQDAIDQAT DKLENAFSFFDKLDIPYFCFHDVDIAPEGNNFAETEIIQKKIVDLISKKLETSKVKLLWGTANLFSHRRYMAGAATNPNP EIFQYAAAQVKMCIENTHHLGGQNYVLWGGREGYETILNTNMKQEFDQLGRFLNMVAEHKHKIGFQGNLLIEPKPHEPTK HQYDFDSANVFAFLQKYGLEKEFKLNIEVNHAILAKHSFEHEIAYALANDIFGSIDINRGDYLVGWDTDQFPNNTEELLL PFYYLFKNQGLGSGGLNMDAKIRRQSIDPEDLFYAHIGAMDTCARTLLAVERMINDGSYEEFLNKRYENWSQNKELMQSS SLESIYEKVKSKDINPEPQSGRQEYLENLLNSFIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 4e-92 | 47 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 3e-92 | 47 |
