Gene Information

Name : HIMB59_00005160 (HIMB59_00005160)
Accession : YP_006757893.1
Strain : alpha proteobacterium HIMB59 HIMB59
Genome accession: NC_018644
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase family protein
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 470425 - 471891 bp
Length : 1467 bp
Strand : +
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGTCTAAAACTATTGATTTTTCAACCCAATTAGTAATCGGAGGAAGACCTGTTCCAGGTGTGGAAGGAAAAACTTTTGA
TACCATAAACCCTGCAAATGGAAAAGTTTTAGCAAGTATTGCGGAAGCGAATAGCGAAGATGTGAATAACGCTGTGAGCG
CTGCGCGCAAAGCCTTCGAGCAAGGACCATGGTCGAAGATGGCACCTGCAGAAAGAAAAAAAGTTTTATTGCGATTTGCT
ACTGTTGTCGAAGCTCATTCAGAAGAACTTGCCATGATGGAGGCGATGGAAGCAGGCAAGCCTATAACTGATTGTTTAGA
AATAGATCTTCCTGAAACAGTGAACACATTGCGTTGGCATGCTGAAGCCATAGATAAATTATATGATCAAATTTCACCAA
GTGATCCTAGTGTGCTTTCGATGATTGTCCGAGAGCCGATGGGAGTGGTGGCAGCAATTCTTCCTTGGAATTTTCCAGCC
ATGATGGCTGCTTGGAAATTGGGTCCTATTCTTGCCACAGGAAACACTGTTGTCTTAAAACCTGCTGAACAAACTTCTTT
ATCAACTATTCGTATTGCAGAGTTAGCAGCTGAAGCAGGTATTCCTGATGGTGTGATTAATGTGGTTTGTGGTTTTGGAG
AAACAGTGGGTAAAGTATTAGGTGAGCATCCAGATGTTGACTGTGTTGCCTTTACAGGCTCAACGGAAACTGGAAGAATG
TTTCTTCGATATTCTGCCGACTCCAATTTAAAAAGAGTGCTTTTAGAGTGTGGAGGAAAAAATCCATTTATTGTTATGGA
AGATGCAGAAGATTTAGACACTGCAGCTGACCATGCGACGAATTCAATCTTTTGGAATATGGGAGAGAATTGCTCATCCA
ACTCTCGTCTTTTAGTTCATCAGTCAATCAAAGATCAGCTTTTAGAATTAATTGTAGAAAAATCCAAAGAGTGGGTAGTC
GGCGATCCCTTAAACCCAGCCACCAGAATTGGCCCAATGATCGAACAGGCACATCTAGATAAAGTGGTAGGCTTTATTGA
ACAAGCTCAAAAAGATGAAAACAAATTAGTGATTGGCGGGAAACGAACCCAAGAAGATAGCGGGGGATACTTTGTCGAAC
CAACCATTTTTGATGATGTAAAGCCTGATAATACTCTCTTTTCTGAGGAAGTCTTTGGGCCTGTTTTGGGTATTACGACT
TTCAAAGATCCAGAAGAAGCAATCACTTTAGCTAACAATAATAAGTATGGCTTAGCGGCCTCCGTCTTCACAAGCTCAAA
TAAAACAGCCCATGTTGCAGCAAGAAAAATCAAAGCGGGGACAGTTGCCGTTAATTGTTACGGGGAAGGTGATGCGACTA
CTCCATTTGGGGGTTATAAGCTCTCTGGTTTTGGTGGAAGAGATAAATCACTAGCAGCCCATGATCAGTATTGTGAATTA
AAGACTATTTGGATTGATCTAAAGTAA

Protein sequence :
MSKTIDFSTQLVIGGRPVPGVEGKTFDTINPANGKVLASIAEANSEDVNNAVSAARKAFEQGPWSKMAPAERKKVLLRFA
TVVEAHSEELAMMEAMEAGKPITDCLEIDLPETVNTLRWHAEAIDKLYDQISPSDPSVLSMIVREPMGVVAAILPWNFPA
MMAAWKLGPILATGNTVVLKPAEQTSLSTIRIAELAAEAGIPDGVINVVCGFGETVGKVLGEHPDVDCVAFTGSTETGRM
FLRYSADSNLKRVLLECGGKNPFIVMEDAEDLDTAADHATNSIFWNMGENCSSNSRLLVHQSIKDQLLELIVEKSKEWVV
GDPLNPATRIGPMIEQAHLDKVVGFIEQAQKDENKLVIGGKRTQEDSGGYFVEPTIFDDVKPDNTLFSEEVFGPVLGITT
FKDPEEAITLANNNKYGLAASVFTSSNKTAHVAARKIKAGTVAVNCYGEGDATTPFGGYKLSGFGGRDKSLAAHDQYCEL
KTIWIDLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 9e-107 49
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-68 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-69 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-69 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-69 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-68 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HIMB59_00005160 YP_006757893.1 aldehyde dehydrogenase family protein VFG0082 Protein 6e-69 42