Gene Information

Name : HIMB59_00003830 (HIMB59_00003830)
Accession : YP_006757760.1
Strain : alpha proteobacterium HIMB59 HIMB59
Genome accession: NC_018644
Putative virulence/resistance : Unknown
Product : ATP-dependent carboxylate-amine ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 348075 - 349388 bp
Length : 1314 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit

DNA sequence :
ATGGATGATCAAAATTTAACACCCAGTGTTATTAAAGAAGAATTAGATCGATATGTCATCGGTCAAGATGAAGCAAAAAA
AGCAGTTGCCATTGCGCTACGAAATCGCTGGAGAAGATTAAATATCAAAGATGAAAGTTTACGCGATGATATAATTCCTA
AAAATATTTTAATGATTGGGCCCACAGGTTGTGGTAAAACAGAAATTGCCAGAAAACTTGCTAAACTCACCCATTCTCCT
TTTATTAAAGTTGAAGCAACCAAGTTTACAGAAATTGGATATGTAGGAAGAGATGTAGAACAAATTATTCGTGATCTTAT
TGAAGTTGCAATTAATCTAGAAAAGAAAAAAATCAGAGATCGTTTTATTGATGAAGCCAAGCTTAATGCTGAAGAAACAG
TTTTAAAGGCATTATTGGGAGATAACCCATCAGAAGAAACGAAAGAAAAATTCCGAGGGATGCTTCGTAACAACAAGCTC
AATGACAAAGAAGTTGAAATAGCTATTGATCAAAAATCAAATCCTTTCCAATCTTTAGATATACCAGGCATGCCAGGTGC
GCAGATGGGAATGATTAACATGAATGACATCTTCGGAAAAGGATTGAAAAATAAGAAGAAAACAAAACTAAAAATTGGAG
AGGCTTATGAGCCTCTAATTCAAGAAGAGATTGAAAAGATAGCTGAAAAACAAAACGTCGTTCAAAATGCTATTAAAAGT
GTTCAGGAGAGTGGCATCGTTTTTATTGATGAAATTGACAAGATAGCCCCTAACAGTGAGAGGCGAGGTGGAGATGTTTC
TCGTGAAGGCGTGCAAAGAGACCTCTTGCCATTAATTGAGGGCACTGTCGTTTCTACTAAGTATGGAACCGTTGAAACAA
ATCATATCCTCTTTATTGCCTCTGGCGCTTTTCATCAATCAAAGCCCAGTGACTTGTTGCCAGAACTTCAAGGTAGACTG
CCCGTTAGAGTACGATTAAATGCATTAAAAAAAGATGACTTTATTCGTATCTTAAAAGATACAGATAATAGCTTAACAAA
GCAGTACAAATCTCTATTTGAAACTGAGAACATCGAACTTGAATTTGATGATGAGGCGATTGAAGAGATCGCCAATCTTA
CTGAACAAATCAATAAAGAAGTTGAGAATATAGGCGCAAGAAGGTTACAAACAATGTTTGAAAAAATTTTAGAAAAGTTA
AGCTTCGAAGCTAATCTTAGTGAAAAAAGAACTGAAGTAGTTAGTAAACAATGGGTATCGGATGCTATACAATCAGAGAT
TAAGCCAACAGATGAAAAAAAGTTTATTCTTTAA

Protein sequence :
MDDQNLTPSVIKEELDRYVIGQDEAKKAVAIALRNRWRRLNIKDESLRDDIIPKNILMIGPTGCGKTEIARKLAKLTHSP
FIKVEATKFTEIGYVGRDVEQIIRDLIEVAINLEKKKIRDRFIDEAKLNAEETVLKALLGDNPSEETKEKFRGMLRNNKL
NDKEVEIAIDQKSNPFQSLDIPGMPGAQMGMINMNDIFGKGLKNKKKTKLKIGEAYEPLIQEEIEKIAEKQNVVQNAIKS
VQESGIVFIDEIDKIAPNSERRGGDVSREGVQRDLLPLIEGTVVSTKYGTVETNHILFIASGAFHQSKPSDLLPELQGRL
PVRVRLNALKKDDFIRILKDTDNSLTKQYKSLFETENIELEFDDEAIEEIANLTEQINKEVENIGARRLQTMFEKILEKL
SFEANLSEKRTEVVSKQWVSDAIQSEIKPTDEKKFIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 4e-78 45