Gene Information

Name : HIMB59_00011010 (HIMB59_00011010)
Accession : YP_006758462.1
Strain : alpha proteobacterium HIMB59 HIMB59
Genome accession: NC_018644
Putative virulence/resistance : Unknown
Product : single stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1000724 - 1001191 bp
Length : 468 bp
Strand : +
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence :
ATGGCTGGATCAGTAAATAAAGTAATTCTTCTCGGTAACTTAGGCAAAGACCCTGATATTCGGGCTACCTCAGCTGGTTC
TCGTTTAGCTAGCTTTTCAATAGCGACTTCAACTAAATATAGAAACAAAGAAACTCAGCAACTTGAGGATAAAACTGAAT
GGCATCGTGTAGTTGTCTTTAATGATAAATTAGCCGATGTATGTGAAAAATATCTTCGAAAAGGCTCAAAAGTATATGTT
GAAGGACAATTACAAACACGCAAGTGGACTGATAATAATGGTGTCGATAAATATACAACTGAAGTAGTTATTCCAAACTA
CTCTGGTGTTCTTACCATGTTAGACTCTAGATCGCAGTCTACAATATCTGATGATAATTCTAGTCAAATTGACTCTGCTG
CAGATGAAGCTCTTGGTGGGCCTGATAACTCAACCGCTGAACAGCTTGATGATGATATTCCTTTTTAA

Protein sequence :
MAGSVNKVILLGNLGKDPDIRATSAGSRLASFSIATSTKYRNKETQQLEDKTEWHRVVVFNDKLADVCEKYLRKGSKVYV
EGQLQTRKWTDNNGVDKYTTEVVIPNYSGVLTMLDSRSQSTISDDNSSQIDSAADEALGGPDNSTAEQLDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 4e-29 43
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 3e-29 43
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 4e-29 43
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 2e-28 42