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Name : HIMB59_00010950 (HIMB59_00010950) Accession : YP_006758456.1 Strain : alpha proteobacterium HIMB59 HIMB59 Genome accession: NC_018644 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 993196 - 994458 bp Length : 1263 bp Strand : + Note : PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase DNA sequence : ATGCATGATATTAATTTTATAAGAGAGAATCCTTCACAATTTGACGAGGGTCTAAAAAAAAGATTTTTAGAACCTCAATC TCATATCATTTTAGATTTAGATCTTAAAAAGAGGGAATTATTAACTAAATCTCAAGATCTTCGATCTGAAAGAAAAAATC TTTCTTCTGAATTCTCAAAGCTAAATGATGAAGAAAAATCATCTTTACAAAAAAAAGTTCAAAATATTAAAAATGAAATT GAACAATTCGAAAATGAAATTTCAGATATTGACTCAAAATTAAAAGATTTATTAGCATCTTTACCAAACTTGCCTCATCC AGATGTTCCGGTAGGGGAAGATGAACAGAGTAATATTATTATAAAAAAAGTTGGTGAAATCCCTAAGTATGACTTTAAAC CCAAACCTCATTTTGAACTTGGAGAGGATTTGGAAATGCTTGACTTTGATCAAGCGGGTAAAGTTTCTGGTACTCGTTTT GTTTATGTAAAAAACCATCTAGCGCGTTTAGAAAGAGCAATTGCTAATTTTATGTTGGACAAGCATACCGGTGAATTTGG ATACACCGAAATCATCCCTCCAAATTTGGTTAGAGATGCAGCAGCTTATGGAACTGGTCAACTACCAAAATTTTCTGAAG ATTTATTTAAAACAAACACTGAACATTGGCTAATTCCTACCGCGGAAGTCCCTCTGACTAATTTAGTATTAGATACTATT GTTTCAGAAAAAACTTTACCTCAAAGACTTACCGCATGGACACCTTGCTATCGATCAGAAGCGGGCGCAGCTGGAAGAGA TACAAGAGGTATGATCAGACAACATCAATTCTCAAAAGTAGAATTAGTAAGTATCACCTCTGAAGAAAATTCTGAGGAAG AATTAGAAAGAATGTTAAATTGTGCTACTTCCATTTTGGATGACTTAAATATTCCTTATCAAGTAATGTTGCTATCATCT GGAGACATGGGCTTTTCGGCAGAAAAGACATATGATATTGAAGTTTGGTTACCAGGAGAGGGTAAGTATAGAGAAATTTC ATCTTGTAGTAATTGTAGGTCATTCCAAGCCAGAAGAATGAATGCAAGATATAAATCAGATGATCAAAATAAGTTTGTTC ATACATTGAATGGCTCAGGTCTTGCAGTTGGAAGAACTTTAATTGCTGTTTTAGAAAATTATCAAAATGATGATGGCTCA ATCACTGTGCCGGAAGTTTTATTGCCTTATATGGGAAATATCAAAGTAATTAAGAAATCTTAA Protein sequence : MHDINFIRENPSQFDEGLKKRFLEPQSHIILDLDLKKRELLTKSQDLRSERKNLSSEFSKLNDEEKSSLQKKVQNIKNEI EQFENEISDIDSKLKDLLASLPNLPHPDVPVGEDEQSNIIIKKVGEIPKYDFKPKPHFELGEDLEMLDFDQAGKVSGTRF VYVKNHLARLERAIANFMLDKHTGEFGYTEIIPPNLVRDAAAYGTGQLPKFSEDLFKTNTEHWLIPTAEVPLTNLVLDTI VSEKTLPQRLTAWTPCYRSEAGAAGRDTRGMIRQHQFSKVELVSITSEENSEEELERMLNCATSILDDLNIPYQVMLLSS GDMGFSAEKTYDIEVWLPGEGKYREISSCSNCRSFQARRMNARYKSDDQNKFVHTLNGSGLAVGRTLIAVLENYQNDDGS ITVPEVLLPYMGNIKVIKKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-92 | 50 |
