Gene Information

Name : HIMB5_00003300 (HIMB5_00003300)
Accession : YP_006756276.1
Strain : alpha proteobacterium HIMB5 HIMB5
Genome accession: NC_018643
Putative virulence/resistance : Virulence
Product : L-glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 318209 - 319615 bp
Length : 1407 bp
Strand : -
Note : PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I

DNA sequence : 
ATGAGTGCAAGTAATGTTTTAAAATTTATTAAAGAAAAAGAAGCTGAATTTGTTGATCTAAGATTTACTGATCCAAGAGG
AAAACTACAACACCTAACAATGGATGCTGGAATTGTTGATGAGGATATGATCAATGAGGGTGTGTTTTTTGATGGTTCAT
CAATTGCGGGTTGGAAAGCAATTAACGAGTCAGACATGATTTTAAAACCAGATACTTCTAGAATGTTTATGGATCCTTTT
ACATCACATAATACTGTCGTATTATTTTGTGACATCTTGGATGCGATAAAGAAAACTCCTTATGAAAGAGATCCAAGAGG
TGTAGCTAAAAAAGCTGAAGAATACCTTAAAGCTTCAGGTATAGGTGATAAAGCATTCTTTGGTCCAGAACCAGAATTTT
TTGTTTTTGATGATGTAAGAATCAAAAACGACATGAACGAAGCTGGATTCAAAATTGACAGTAAAGAAGGTCCTTATAAT
TCTGGTAAAGAATATGAAAATGGAAATATGGGGCATAGACCTGGTGTTAAAGGTGGATACTTCCCTGTTCCTCCTGTTGA
TAGTGAACAAGACATGAGAGGTGAATACCTAAAAAGTTTAAAAGATGTTGGAATAAAAGTTGAAAAACATCACCACGAAG
TTGCTCCAAGTCAACATGAACTAGGTATGTATTTTGGAACATTGGTTGATCAAGCGGATAATGTTCAACTATATAAATAT
GTTGTGCAAATGGTAACTCACTCATTTGGAAAAACTGCAACATTTATGCCTAAGCCTGTTGCTGGAGATAATGGATCAGG
CATGCATATTCACCAATCAATTTGGAAAGGTGATACTCCCGTGTTTTCTGGTGATGCGTACTCAGGATTATCAGAAACGG
CATTGCATTATATTGGAGGAATTTTAAAACATGCTAAAGCCATTAATGCTTTTGCTAACTCAACAACAAACAGTTACAAA
AGATTAATTCCAGGATTTGAAGCGCCAGTATTACTTGCTTACTCAGCAAGAAATAGATCTGCTTCATGTCGTATCCCAAT
TACATTAAGTAAAAAAGGTGCAAGATGTGAAATTAGATTTCCTGATGCGGCTGGAAATCCATATTTAACATTTGCAGCTA
TGTTAATGGCAGGATTAGATGGAATTAAAAATAAAATTCATCCAGGTGAATCTTTTGATAAAGATTTATATGAATTACCC
GCTGAGGAAGTTAATAAAATTCCAACAGTTTGTGGATCGTTAAGAGAAGCAATGGAAAGTTTAGATAAAGATAGAGAATT
TTTAACTCAAGGTGGTGTATTCACTGATGATCAGATTGATGCTTATATCGCTTTGAAGTTTGAGGAAATTCACAAGTTTG
AACACGCACCTCATCCTGTAGAGTTTGAGATGTACTACAGTAGTTAA

Protein sequence : 
MSASNVLKFIKEKEAEFVDLRFTDPRGKLQHLTMDAGIVDEDMINEGVFFDGSSIAGWKAINESDMILKPDTSRMFMDPF
TSHNTVVLFCDILDAIKKTPYERDPRGVAKKAEEYLKASGIGDKAFFGPEPEFFVFDDVRIKNDMNEAGFKIDSKEGPYN
SGKEYENGNMGHRPGVKGGYFPVPPVDSEQDMRGEYLKSLKDVGIKVEKHHHEVAPSQHELGMYFGTLVDQADNVQLYKY
VVQMVTHSFGKTATFMPKPVAGDNGSGMHIHQSIWKGDTPVFSGDAYSGLSETALHYIGGILKHAKAINAFANSTTNSYK
RLIPGFEAPVLLAYSARNRSASCRIPITLSKKGARCEIRFPDAAGNPYLTFAAMLMAGLDGIKNKIHPGESFDKDLYELP
AEEVNKIPTVCGSLREAMESLDKDREFLTQGGVFTDDQIDAYIALKFEEIHKFEHAPHPVEFEMYYSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-118 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HIMB5_00003300 YP_006756276.1 L-glutamine synthetase VFG1399 Protein 1e-102 49