Gene Information

Name : HIMB5_00014080 (HIMB5_00014080)
Accession : YP_006757322.1
Strain : alpha proteobacterium HIMB5 HIMB5
Genome accession: NC_018643
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 1291014 - 1291934 bp
Length : 921 bp
Strand : +
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence : 
ATGAATAAAGAAATAATTATTGGAACCCGAGGAAGTAAACTTGCATTGATTTATGCACAAAAGGTAAAAGATCAACTTAT
AAAACTTGCCAATATTTCAGATGAACAAATTAAATTAAAAGAAATTGTAACAAAAGGCGATCAAGTAAAAGACAAAAGAC
TCTCTGAAATTGGAGGGAAGGGCTTATTTTCCAAAAATATTGAAATTGAATTATTAGAAGGCAATATAGATGTTGCTGTT
CATGCACTTAAAGATATGCCCGCTAATGAAACTAAAAATTTATCTACATATGCTTATTTAAAAAGAAATGATCCAAGAGA
AGTTTTCATTGCTAAAAATAATAAAAAAATTAGTGAACTAAATTTCAATGCAATTGTAGGCACGTCGTCATATAGAAGAG
AGTTTCAAATTAAAAAAATTAGAAATGACTTAGAAAGCAAGTTGATAAGAGGAAATGTAGACACAAGAATTAGAAAATTA
GATGAAGGCCAATATGATGCTATAATGTTATCTTATGCAGGATTGGATGCTTTGAGTTTAAATAGTAGAATTTCTCAAAC
ATTTTCCGTATCAGAAATATTACCAAGTGCAGGACAAGGTATTATAGCGTTACAATGTAGGTCAGATGATCAGGAAATTA
AAACAACACTTAATAAAATAAACGATCATCATACAAAATTAAGAGCAATCACAGAAAGAAATGTATTAAAAGTTTTAGAT
GGTGATTGTGAAACAGCTGTTGGCGTACATTCTGTAATTGAAGAAGACAAAATAACTCTTGAGGCAGAATTGTTTTCTTT
AGATGGCACACAAAGATTTTATGAAAAAAAAAGTTCAAATATTTTAAATTGTGAAAAATTAGGTATAGAGGTCGGTAAAA
TTTTAAAAGAAAAATCAAAAGATAGTTACAAAAAAAAATAA

Protein sequence : 
MNKEIIIGTRGSKLALIYAQKVKDQLIKLANISDEQIKLKEIVTKGDQVKDKRLSEIGGKGLFSKNIEIELLEGNIDVAV
HALKDMPANETKNLSTYAYLKRNDPREVFIAKNNKKISELNFNAIVGTSSYRREFQIKKIRNDLESKLIRGNVDTRIRKL
DEGQYDAIMLSYAGLDALSLNSRISQTFSVSEILPSAGQGIIALQCRSDDQEIKTTLNKINDHHTKLRAITERNVLKVLD
GDCETAVGVHSVIEEDKITLEAELFSLDGTQRFYEKKSSNILNCEKLGIEVGKILKEKSKDSYKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-41 41
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-41 41