Gene Information

Name : HIMB5_00013020 (HIMB5_00013020)
Accession : YP_006757217.1
Strain : alpha proteobacterium HIMB5 HIMB5
Genome accession: NC_018643
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1193839 - 1195230 bp
Length : 1392 bp
Strand : +
Note : PFAM: Lyase; TIGRFAM: argininosuccinate lyase

DNA sequence :
ATGACAAATAATAAAAACAATAAAGCAATATGGAATACTAGAATAAAAAAGAAATCTTCTATTTTATATCAAAAAGCTGG
AAGCTCTTTAGATATAGATAAAAGACTTTTTAAAGAAGATATTTTAGGATCAAAGGCCCATGTTGAAATGCTCTTTAGAC
AGAAAATTATTTCTTTCAAAATAAAAAATAAAATCATCTATGGATTGGACAAAATTGAGAAAGAAATAAAAAATAAGAAA
TTTATTTTTAAAAAAGAATATGAGGATATTCACATCAATATTGAAAAAAGACTTCATGAAATAATTGGTGAGGAAGCGGG
ATATATCCATACAGCTCGATCAAGAAATGATCAGGTTATAACTGATTTTAAATTATGGATTAAATCTTCTACAAAAAATT
TAGATTTTGAAATACAGAATTTGATTAAATCTATTATTAAAATAGCTGAAAAAAATGTTGAAACAATAATGCCTGGTTTT
ACACATTTAAAAAATGCTCAACCGATTTCATTTGCTCATTATTTGTTATCTTTTGTTGAAATGTTTAATAGAGATAGATT
TAGATTTAATAATAACTTAGAAAATTTAAATGAAAATCCACTTGGTGTTGGGGCCTTAACTGGAACTTCATTTAATATTG
ATAGAAATTACACAACAAAAAAACTTGGTTTTAAGAAGCCTACAAACAATTCTGTAGACACTGTTTCTGATAGAGATTTT
GTTTTAGATTTTCTATTCAGTTCATCTGTATGTGCTATGCATATTTCAAGAATTGCTGAAGAGTTAATAATTTGGAATTC
TGATGCTTTTAGATTGATTTCCTTGAGTGATCAAATAGTTACTGGTTCTTCAATAATGCCTCAGAAAAAAAATCCTGATC
TTCTTGAATTTTTGCGAGGAAAAACAGGATCATCTTATGGAAATCTTTTTTCAATGTTAACAATTTTAAAAGGTCTTCCA
ATGTCTTATTTTAAAGACTTACAGGATGATAAGCAGCTAGTGTTTTCCTCTTATGATAATTTAATTGATAGTTTAAAAAT
TTTAAACGAAGTTTTTAACAATATAACGCCAAATAAAAAGAATATGATCAAATTAGCTGAAACTGGGTTTATCACTGCAA
CAGATTTAGCAGACTATCTGGTAAAAAATTGTTCTATGCCGTTTAGAGATGCATATCAAAAAACAGCATCAATTATAAAT
TATGCTGAAAAGAGTAAAAAAGAACTTAAGGAATTAACTCTCGATGAATTAAAAAAATTCAATCCTAAGTTTACGAGTGA
TGTACTTTCAATATTCGAATTAAAAAATTCAATAAATTCTAAAAAATCTTTTGGAGGAACGTCTTTTAGTAATATAAAAA
AGATGATAGTCAAATATAAGAAAAATTTATGA

Protein sequence :
MTNNKNNKAIWNTRIKKKSSILYQKAGSSLDIDKRLFKEDILGSKAHVEMLFRQKIISFKIKNKIIYGLDKIEKEIKNKK
FIFKKEYEDIHINIEKRLHEIIGEEAGYIHTARSRNDQVITDFKLWIKSSTKNLDFEIQNLIKSIIKIAEKNVETIMPGF
THLKNAQPISFAHYLLSFVEMFNRDRFRFNNNLENLNENPLGVGALTGTSFNIDRNYTTKKLGFKKPTNNSVDTVSDRDF
VLDFLFSSSVCAMHISRIAEELIIWNSDAFRLISLSDQIVTGSSIMPQKKNPDLLEFLRGKTGSSYGNLFSMLTILKGLP
MSYFKDLQDDKQLVFSSYDNLIDSLKILNEVFNNITPNKKNMIKLAETGFITATDLADYLVKNCSMPFRDAYQKTASIIN
YAEKSKKELKELTLDELKKFNPKFTSDVLSIFELKNSINSKKSFGGTSFSNIKKMIVKYKKNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 3e-67 41
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 3e-67 41