Gene Information

Name : LMOL312_2388 (LMOL312_2388)
Accession : YP_006755517.1
Strain : Listeria monocytogenes L312
Genome accession: NC_018642
Putative virulence/resistance : Virulence
Product : iron compound ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 2469981 - 2470772 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATCAGCATTAGAACTAAAAAATGTTTCTTTCTCACGTAAAAGAGATTTCGAAATGAAAAACGTGAGCGCGAGTAT
TCCAGAAGGGAAAATCACTACGCTTATCGGTCCAAACGGCTCGGGAAAATCGACTATGCTGCGTTTGATGATGCGCCTTT
TGACACCGGATAGCGGGGAGATTTTCTTAAATGATAAAAACATTACTGAAATCCCATCTAAAGATTTAGCGAAAAAAATG
ACGATGTTATCACAAGCTCCAGAAGGGTTGGTAGATGTGATGGTGCATGATTTAGTGGCGTATGGCCGTTTGCCGCACCG
AAGCTGGCTCTCCACTCTGCAAGAGGAGGACGAGGCGGTCATTCACTGGGCTATTAAAGTGTGCAACTTAGAAGAATTGG
CTTATCGCCCGCTACATTCGTTATCAGGCGGAGAAAGACAACGCGCTTGGCTCGCCATGGCTCTTGCACAAAAAACACCG
ATTTTATTACTAGATGAGCCCACGACTTATTTAGATATTGCGCATCAACTGGAGCTTTTAGATTTACTCGTGCATTTAAA
TAAAGAATATAATTTAACTATCGTGCTCGTTTTACATGATTTAAATCAGGCAGCAATTTACAGTGACCATGTTTTTGTAT
GCGAAAATGGACAATTAGTCAAAGATGGCTCGCCTATAGAAGTTTTCACGACAGAGCTTCTTCGCGAGGTTTTTCATATT
ACGGCGGATATTACCGAAAAAGACGGAAAGCAGCATATTCATCCACTTGCTTCGACTCGTTTTGAATATTAA

Protein sequence : 
MKSALELKNVSFSRKRDFEMKNVSASIPEGKITTLIGPNGSGKSTMLRLMMRLLTPDSGEIFLNDKNITEIPSKDLAKKM
TMLSQAPEGLVDVMVHDLVAYGRLPHRSWLSTLQEEDEAVIHWAIKVCNLEELAYRPLHSLSGGERQRAWLAMALAQKTP
ILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDHVFVCENGQLVKDGSPIEVFTTELLREVFHI
TADITEKDGKQHIHPLASTRFEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-40 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-44 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-44 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-44 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-44 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-37 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-38 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOL312_2388 YP_006755517.1 iron compound ABC transporter, ATP-binding protein BAC0164 Protein 3e-40 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOL312_2388 YP_006755517.1 iron compound ABC transporter, ATP-binding protein VFG1042 Protein 3e-40 49
LMOL312_2388 YP_006755517.1 iron compound ABC transporter, ATP-binding protein VFG0925 Protein 2e-34 43