Gene Information

Name : arsB (LMOL312_1297)
Accession : YP_006754426.1
Strain : Listeria monocytogenes L312
Genome accession: NC_018642
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1312718 - 1314013 bp
Length : 1296 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGATTACTTTAGCTATTTTAGTATTTGCCTTCACATTATTTTTTGTGATTTGGCAACCAAGAAAATTATCAATCGG
ATGGTCAGCTTGCGGAGGTGCGCTAATTGCCATATTACTTGGCGTCGTCACTTTATCAGATGTCGCAACAGTTACTGGAA
TTGTTTGGAATGCGACGCTCGCTTTTATTGCTATTATAATTATTTCATTGATTTTAGATAAAATTGGCTTTTTTGAGTGG
GCGGCTTTACATATGGCGCGATTAGCAAGAGGTAATGGGTTATTAATGTTTATTCTTATTTCTATTTTGGGAGCTTTCGT
TGCTGCGTTGTTTGCTAATGACGGGGCGGCGCTAATTTTGACACCAATTGTTCTAGCGATGGTGCGAGCGCTGAATTTTG
ATGAGAAAAAGGTATTTCCATTTATTATTGCTAGCGGTTTTATAGCAGATACGACGTCCTTGCCGCTCGTAGTTAGTAAT
TTAGTCAATATAGTTTCGGCTGATTTTTTCGGTATTAGTTTTTCGCAGTATGCGCTTATTATGTGGATTCCAACGCTTTT
CTCTTTAGTTGCGAGTATTTTAATCTTATATTTTTATTTTCGGAAAGCATTACCTAAAAAATATGATATGCGAGTGATTC
GAGAGCCAGCTTCTGCAATTAAAGATAAAAAGATGTTTCGTGTTTCTTGGGGAATACTTATCATCCTTGTAGCAGGCTAT
TTTTTGAGTAGTTTTTTAGATATTCCAGTGTCATTTATTGCCTTGCTAGTTGCTGTTATCTTTTTGTTAGTCAGTGCAAA
AAGTCATGCGGTCTCGACAAAAGCTATTTTAAAAGGAGCACCTTGGAATATTGTGTTTTTCTCGGTTGGTATGTATGTAG
TTGTATATGGTTTGCAAAATGTCGGTATCACAAAATTATTATCAGAAGCAATTACATATGTTGCGCACTTTGGTTTATTT
GCGGGAACAGTTGGAATGGGATTTATTGCTGCAATACTGTCTTCTGTCATGAATAATTTGCCAACAGTAATGATAAATGC
ACTTGCAATCGATCATACGTCATTTACAGGCGTGATGAAAGAAGCGTTAGTCTATGCAAATGTCATTGGTTCTGATTTAG
GTCCGAAAATAACACCAATTGGCTCGCTAGCAACTTTACTTTGGCTACATGTTCTAGCGCAGAAAGGGATAAAGATAAGC
TGGGGCTCTTATTTCAAAATTGGCATTGTGATTACTATTCCAGTTTTATTCATAACGCTCGTCGGACTATATTTTTCACT
GCTTATTTGGAATTAA

Protein sequence : 
MQITLAILVFAFTLFFVIWQPRKLSIGWSACGGALIAILLGVVTLSDVATVTGIVWNATLAFIAIIIISLILDKIGFFEW
AALHMARLARGNGLLMFILISILGAFVAALFANDGAALILTPIVLAMVRALNFDEKKVFPFIIASGFIADTTSLPLVVSN
LVNIVSADFFGISFSQYALIMWIPTLFSLVASILILYFYFRKALPKKYDMRVIREPASAIKDKKMFRVSWGILIILVAGY
FLSSFLDIPVSFIALLVAVIFLLVSAKSHAVSTKAILKGAPWNIVFFSVGMYVVVYGLQNVGITKLLSEAITYVAHFGLF
AGTVGMGFIAAILSSVMNNLPTVMINALAIDHTSFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVLAQKGIKIS
WGSYFKIGIVITIPVLFITLVGLYFSLLIWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-124 67
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-119 66
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 7e-120 65
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-98 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_006754426.1 arsenical pump membrane protein BAC0574 Protein 5e-122 66
arsB YP_006754426.1 arsenical pump membrane protein BAC0575 Protein 6e-121 66
arsB YP_006754426.1 arsenical pump membrane protein BAC0576 Protein 2e-99 58
arsB YP_006754426.1 arsenical pump membrane protein BAC0578 Protein 5e-99 58
arsB YP_006754426.1 arsenical pump membrane protein BAC0577 Protein 6e-99 57
arsB YP_006754426.1 arsenical pump membrane protein BAC0031 Protein 3e-96 56