Gene Information

Name : opuCA_2 (BN194_27410)
Accession : YP_006752807.1
Strain : Lactobacillus casei W56
Genome accession: NC_018641
Putative virulence/resistance : Unknown
Product : Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2746986 - 2747945 bp
Length : 960 bp
Strand : -
Note : Product derived from UniProtKB/Swiss-Prot:O34992;Gene name derived from UniProtKB/Swiss-Prot:O34992

DNA sequence : 
ATGGCATTGATCAGTCTGGAACACGTCACAAAGGAATATGACGGCAAGCCCGTGGTCAACGATCTTAGCCTGAAGGTCGA
TCAAGGGGAGTTGTTTGTGCTAGTCGGCACCTCCGGCAGCGGCAAAACCACGACGCTGAAAATGATCAATCGTTTGGTTG
ATCCAACGAGCGGCGTCATCGAATTTGCCGACAAACCGCTCACCAGTTACAAAATGCGCGACTTGCGGTGGGATCTGGGG
TATGTCCTGCAGCAGATCGCCTTGTTTCCAACCATGACAGTGGCGCAAAACATTGCCGTGATCCCCGAAATGAAGGGCTG
GTCGCGCCAAAAAATTCGGACGGCAACAGACGAGTTACTCACAACAGTTGATTTGCCGCCAGCCGAGTACCGCAATCGCA
TGCCAAGCGAATTATCCGGCGGGCAGCAGCAACGCATCGGTATTTTGCGGGCCTTAGCATCACGGCCTAAGGTGGTCTTG
ATGGACGAACCGTTCTCAGCATTAGATCCGATTTCCCGCACTCAGCTTCAGGATATGCTGCTGCATTTGCATCGTGCCTT
GAAGACCACTGTCATTTTTGTGACCCACGATATGGCTGAAGCGATGAAACTTGGTGATCGGATCGGCGTGATGCGCGGTG
GCAAACTCTTGCAGGTTGATACGCCGGAAGAAATTGCGACCAATCCGGCTAACGATTTCGTGGCGGATTTGTTCAAGGGA
GCGCAAGCCAATCAGGGTCTGCAGGTCACGCTCAGTCAGTTAGCACCATTTGCAGCGGATGTGTCGGCCCGGCATGCGGT
TGGCGGCAACTTGACGCTGGCCGAGGCGTTGCCGCTTTTAGATGCGCATGAGGCGTTGCGCGTGAATAGTGAACATGGTG
CGTTTGTTGTCAATACCCATAGTGTTGTCGCTTATCTCGCAAGTGCATTTGTCGATCAGAACACAGAGACGAAGGAGTGA

Protein sequence : 
MALISLEHVTKEYDGKPVVNDLSLKVDQGELFVLVGTSGSGKTTTLKMINRLVDPTSGVIEFADKPLTSYKMRDLRWDLG
YVLQQIALFPTMTVAQNIAVIPEMKGWSRQKIRTATDELLTTVDLPPAEYRNRMPSELSGGQQQRIGILRALASRPKVVL
MDEPFSALDPISRTQLQDMLLHLHRALKTTVIFVTHDMAEAMKLGDRIGVMRGGKLLQVDTPEEIATNPANDFVADLFKG
AQANQGLQVTLSQLAPFAADVSARHAVGGNLTLAEALPLLDAHEALRVNSEHGAFVVNTHSVVAYLASAFVDQNTETKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-38 47
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-38 47