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Name : clpC (BN194_21680) Accession : YP_006752234.1 Strain : Lactobacillus casei W56 Genome accession: NC_018641 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 2145463 - 2147679 bp Length : 2217 bp Strand : - Note : Product derived from UniProtKB/Swiss-Prot:Q5XCL7;Gene name derived from UniProtKB/Swiss-Prot:Q5XCL7 DNA sequence : TTGCACAGCACTTTCTCAGCATCCACGCCTTTTCCGAGCACTTTCCCAACAAGGAGGAATGAAGTTATGGCAAACTTTAA CGATCCGTTTTTCAATCATGATATGGATGATGTTTTTAATCAAATGTTACAAGGTATGGGCAAAGGTGAATCTGCCCGTT ATGTGGTAAATGGTCACGAAATGACGCCAGATGAATTCGCACAGTATCGAGCAACTGGGCAGTTGCCGAAGCAAGGTGAC GAAATTCCAGTTGAAACGACTGGTGAACAAGCGGTTAAAAAAGGTGGCATTCTTGAAAAGCTTGGGCGTAATTTAACGCA GGAAGCTAAGGATGGTTTGCTTGATCCTGTGATCGGTCGTGAGCATGAAATTCAAGAAACAGCAGAAATTTTGAGTCGTC GGACGAAGAATAACCCGATTTTGGTCGGGGATGCCGGTGTCGGCAAGACGGCGGTTGTTGAAGGTTTGGCGCAGGCGATT GTCAAAGGCAATGTGCCCGAGTCGATCAAGGACAAGCAGATTTGGTCAATTGATTTGTCGAACCTTGAAGCTGGTACGCA GTATCGTGGCAGTTTTGAAGAGAAGATTCAGAATCTGATCAAAGAAGTCAAAGCGGCAGGCAACGTGATTCTGTTCTTTG ATGAAATCCATCAAATTCTCGGTGCCGGTGCGACTGGCGGTGAAGAGTCTGGCGGCAAAGGGTTGGCCGATATCATCAAG CCGGCGCTATCTCGCGGTGAGATTACCGTGATTGGCGCAACGACGCAAGATGAGTATCGCAACACGATCATGAAGGACAG CGCGTTGGCACGGCGGTTCAACGATGTCACCATTAATGAACCGACTGCGGCTGATACCGTTAAGATTTTGGAAGGCATCA AGAAGCTTTATGAACAGCATCATCACGTTCAATTGCCAGAAAATGTTTTGAAGGCTGCGGTTGATTACAGTATCCAATAT ATACCACAGCGGTCATTGCCGGATAAAGCCATTGATTTGATTGACATGACGGCGGCGCATTTGGCAAGCAAGCATCCGAT TGTTGATAAGGTTGAACTCGAGAAACAGATTAAGGATCTGAACACACAAAAGGATGCTGCAGCCAAGGCGGAGGACTTCG AAAAAGCCGCTAACCTTAAGAAGACGATTGCCGACAAGCAACATCAGCTTGATGGTACGAAAGACGAGAAGCCTGTCGTT GCAACGCCTAATGATGTAGCGGCTGCGGTTGAACGCTTGACTGGTGTGCCAGTTTCCAAACTTGGCGCTTCCGATATTGA ACGTCTGAAGGGTATTGGTAAGCGTCTGAAGGGCAAGGTCATTGGTCAGGATGAAGCCGTTGAGATGGTCGCTCGCGCCA TTCGCCGCAACCGAGCCGGTTTTGATGAAGGCAATCGGCCAATTGGCAGTTTCCTCTTTGTCGGGCCTACCGGTGTCGGC AAGACTGAATTGGCTAAGCAATTGGCGTTAGATCTTTTTGGCAGCAAGGATGCGATCATTCGCTTGGATATGTCTGAATA CAGTGATCGCACGGCAGTTTCCAAGTTGATCGGTACCAGTGCCGGGTATGTTGGCTATAACGACAACAACAACACCTTGA CCGAACAAGTACGTCGCAATCCGTATTCGATTGTTTTACTTGATGAAATCGAAAAGGCTGATCCGCAAGTTTTGACTCTG TTACTTCAGGTGCTGGACGACGGTCGGTTGACGGATGGCCAAGGTAACGTGGTTGACTTTAAGAACACAGTGATCATCGC GACTTCCAATGCTGGCTTTGGCAACGAGACGCTGACTGGCAAGAAGGAGCAAGACGAAGATCTGATGAAGCGGTTGGCAC CTTACTTCCGTCCTGAATTCCTGAACCGGTTTAACGGGATCGTTGAGTTTAGTCATCTAACCAAGAAAGATTTGGGTAAG ATCGTTGACTTAATGCTTGATGACGTTAATAACACCTTGACCAAGAAGGGGATCACGTTAACCGTTACCGCCGCAGCCAA GGATTGGTTGATTGAACAAGGTTATGATGAAGCAATGGGCGCACGGCCATTACGGCGTGTGATCGAACGCAACATTCGTG ATAAGGTGACTGACTTCTATTTGGATCATTTAAAGGCTAAGAAGTTGCAAGCTGATCTGGTTGATGATGCAATTGTGATT AGCGAGAAGCAACCGACAGCTGGTAAATCAAAGAAAGTAGCCGATGGTGCGAAGTAA Protein sequence : MHSTFSASTPFPSTFPTRRNEVMANFNDPFFNHDMDDVFNQMLQGMGKGESARYVVNGHEMTPDEFAQYRATGQLPKQGD EIPVETTGEQAVKKGGILEKLGRNLTQEAKDGLLDPVIGREHEIQETAEILSRRTKNNPILVGDAGVGKTAVVEGLAQAI VKGNVPESIKDKQIWSIDLSNLEAGTQYRGSFEEKIQNLIKEVKAAGNVILFFDEIHQILGAGATGGEESGGKGLADIIK PALSRGEITVIGATTQDEYRNTIMKDSALARRFNDVTINEPTAADTVKILEGIKKLYEQHHHVQLPENVLKAAVDYSIQY IPQRSLPDKAIDLIDMTAAHLASKHPIVDKVELEKQIKDLNTQKDAAAKAEDFEKAANLKKTIADKQHQLDGTKDEKPVV ATPNDVAAAVERLTGVPVSKLGASDIERLKGIGKRLKGKVIGQDEAVEMVARAIRRNRAGFDEGNRPIGSFLFVGPTGVG KTELAKQLALDLFGSKDAIIRLDMSEYSDRTAVSKLIGTSAGYVGYNDNNNTLTEQVRRNPYSIVLLDEIEKADPQVLTL LLQVLDDGRLTDGQGNVVDFKNTVIIATSNAGFGNETLTGKKEQDEDLMKRLAPYFRPEFLNRFNGIVEFSHLTKKDLGK IVDLMLDDVNNTLTKKGITLTVTAAAKDWLIEQGYDEAMGARPLRRVIERNIRDKVTDFYLDHLKAKKLQADLVDDAIVI SEKQPTAGKSKKVADGAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-115 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_006752234.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 3e-126 | 49 |
| clpC | YP_006752234.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 7e-116 | 46 |
