Gene Information

Name : rplS (BN194_17770)
Accession : YP_006751843.1
Strain : Lactobacillus casei W56
Genome accession: NC_018641
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1754686 - 1755150 bp
Length : 465 bp
Strand : -
Note : Product derived from UniProtKB/Swiss-Prot:B3WET9;Gene name derived from UniProtKB/Swiss-Prot:B3WET9

DNA sequence :
ATTTTCACCTTTACACGTCCAACCAGTCATGGTAAACTTATTGACTGTGATACGTCACACATCAACGACATTCCGCTGGT
CGGGATGATTATGAATGTCGGCAAAGGAGAAATACCCATGAACCCATTGATTCAAGAAATTACCAAGAAACAGTTACGCG
ATGACATTCCAGACTTCCGTCCTGGTGATAACGTCCGTGTCCATGCCAAGATCGTTGAAGGCGAACGCGAACGTATCCAG
CTCTTCGAAGGCGTTGTTATCAAGCGTCACGGCGTTGGCATTTCCGCTACTTATACAGTACGTAAGATCTCAAATGGCGT
TGGTGTGGAACGGACATTCCCGTTACATTCACCACGTGTTGAAAAGATCGAAGTTACCCGTCACGGCCAAGTGCGTCGGG
CAAAGCTCTACTACCTGCGCGCATTACGTGGGAAAGCAGCTCGTATCCGCGAAAAGCGTCGTTAA

Protein sequence :
MFTFTRPTSHGKLIDCDTSHINDIPLVGMIMNVGKGEIPMNPLIQEITKKQLRDDIPDFRPGDNVRVHAKIVEGERERIQ
LFEGVVIKRHGVGISATYTVRKISNGVGVERTFPLHSPRVEKIEVTRHGQVRRAKLYYLRALRGKAARIREKRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 6e-32 78
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 4e-20 54