Gene Information

Name : MASE_00470 (MASE_00470)
Accession : YP_006746223.1
Strain : Alteromonas macleodii ATCC 27126
Genome accession: NC_018632
Putative virulence/resistance : Unknown
Product : phosphomethylpyrimidine synthase ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 105223 - 107133 bp
Length : 1911 bp
Strand : -
Note : COG0422 Thiamine biosynthesis protein ThiC

DNA sequence :
ATGTCGAACAGACGCGAACAGCGCCAACAAGCACAACAATTCATTAATGAACTTGCGGGCGAAGCTTACCCAAATTCAAC
ACGCCACTACGAGTGTGGCAGCCGTGACGATATTCGTGTGGCCATGCGCCTTATTCACCAACACGACAGTTTAGTGGGTG
GTACTGAAGACAATCCTATTTTAGAGCCAAATCCGCCAATTCCTGTTTACGACACTTCAGGCCCCTACGGCGACCCAAAA
GAAAACATAGATGTGCACAAAGGCCTAGCTCCGCTTCGCCAAAAGTGGATTGAAGAGCGTAGCGATACCCTTGAATTAGA
GGGCGTTTCGTCAAGCTTTGCAAAAGAGCGAGAAAACGACATATTTACCGAAGATTTCCGCTTTATTCGCAGCCGCAAAC
CACTAAAAGCAAAAGCAGGCAAAAACGTAACCCAGCTTCACTACGCAAGACAGGGCATTATTACTCCTGAAATGGAATAC
ATTGCCATTCGCGAGAATATGGGTCGCCAGGCCATTAAAGATGCCGAACTGACGCAGCAGCACAAAGGCGAACACTTTGG
TGCGAATTTACCCGATACCATCACGCCTGAATTTGTACGCCAGGAAGTGGCCGCAGGCCGCGCCATTATTCCATGCAACA
TCAATCACCCCGAGTTGGAACCAATGATTATAGGGCGTAACTTTCTAGTAAAGATTAACGCAAACATTGGTAATTCAGCA
GTCACCTCGTCTATTGAAGAAGAGGTAGAAAAGCTGGTGTGGTCAACGCGCTGGGGCGCCGATACCATCATGGATTTATC
TACCGGCAGAAACATTCACGAAACCCGAGAGTGGCTGCTGCGAAACAGTCCTGTTCCTCTTGGCACCGTCCCCATCTATC
AAGCGCTAGAAAAAGTAAACGGTGTAGCCGAAGATTTAACGTGGGAGATGTTTAAAGACACCCTAATTGAGCAAGCTGAA
CAAGGCGTAGACTACTTCACCATTCACGCTGGCGTGCTGCTTGAGTACGTACACCTTACCGCAAAGCGGGTAACCGGCAT
TGTATCGCGCGGCGGTTCGATAATGGCAAAGTGGTGCTTAAGCCACCACCAACAAAGCTTTCTGTATGAGCACTTTCACG
ATATTTGCGAAATTTGCGCTAAGTACGATGTGGCGCTGTCGCTAGGTGATGGCCTGCGCCCTGGTAGCGTAGCTGACGCT
AACGACGACGCGCAATTCTCTGAATTACGTACCCTTGGAGAGCTGACGAAAATTGCATGGGAGTACGATGTTCAGGTAAT
GATTGAAGGCCCGGGGCATGTGCCAATGCATATGATTAAAGCGAACATGGAAGAGCAGCTTAAGCATTGCCACGAAGCAC
CGTTTTATACCCTTGGCCCCCTCACCACCGATATCGCTCCTGGCTACGATCACTTCACTTCAGGTATAGGTGCCGCCATG
ATTGGTTGGTATGGCTGCGCAATGCTGTGCTATGTAACACCTAAAGAGCATTTGGGCCTACCTAACAAAGAAGACGTTAA
ACAGGGGCTGATCACCTACAAAATTGCAGCCCACGCTGCCGACTTGGCAAAAGGCCACCCAGGTGCACAAATTCGCGACA
ACGCCATGTCGAAAGCTCGCTTTGAATTCAGGTGGGAAGACCAGTTCAATTTAGCTCTCGACCCACATACCGCGCGCGCT
TATCACGATGAAACCTTGCCGCAGGCGTCTGGCAAAGTTGCGCATTTCTGCTCTATGTGCGGCCCTAAATTTTGCAGCAT
GAAAATTTCTCAGGAAGTGCGCGATGTGGCTAAACAAGCGGAGCAGCAAGAGTTTGAGAAAGAAAAAGGTATGAAAGAGA
TGGCCCAGGCATTCAATCAGTCTGGCGCAGAGCTTTATCACACTGCAGATAGCAAGGTAGAGCTACTATGA

Protein sequence :
MSNRREQRQQAQQFINELAGEAYPNSTRHYECGSRDDIRVAMRLIHQHDSLVGGTEDNPILEPNPPIPVYDTSGPYGDPK
ENIDVHKGLAPLRQKWIEERSDTLELEGVSSSFAKERENDIFTEDFRFIRSRKPLKAKAGKNVTQLHYARQGIITPEMEY
IAIRENMGRQAIKDAELTQQHKGEHFGANLPDTITPEFVRQEVAAGRAIIPCNINHPELEPMIIGRNFLVKINANIGNSA
VTSSIEEEVEKLVWSTRWGADTIMDLSTGRNIHETREWLLRNSPVPLGTVPIYQALEKVNGVAEDLTWEMFKDTLIEQAE
QGVDYFTIHAGVLLEYVHLTAKRVTGIVSRGGSIMAKWCLSHHQQSFLYEHFHDICEICAKYDVALSLGDGLRPGSVADA
NDDAQFSELRTLGELTKIAWEYDVQVMIEGPGHVPMHMIKANMEEQLKHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPHTARA
YHDETLPQASGKVAHFCSMCGPKFCSMKISQEVRDVAKQAEQQEFEKEKGMKEMAQAFNQSGAELYHTADSKVELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 72
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 72
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 69