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Name : MASE_18935 (MASE_18935) Accession : YP_006749827.1 Strain : Alteromonas macleodii ATCC 27126 Genome accession: NC_018632 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 4443181 - 4444407 bp Length : 1227 bp Strand : + Note : COG1459 Type II secretory pathway, component PulF DNA sequence : ATGGCGGCATTCGCTTTTAAGGCGGTTAATGCCCGCGGTAAAAATACAAATGGCGTACTTGAAGGTGATAATGCACGCCA GGTTCGCCAACAGCTGCGCGAAAAAGGTTTAATTCCCTTAGAAGTAGAGCAGGTCGCAGAGCGCGCACAAAGCGAAGGCA AAGGCCTGTCGTTTTCTTTATTTAAACCCCGTATTTCAGCATCAGACTTAGCGCTACTCACGCGTCAGCTCGCCACCCTT GTAGAATCGGCCCTTCCCGTTGAAGAAGCACTGCTTGCCGTCGCTGAACAGTGTGAAAAGCCTCGTCAGAAAAACATGAT GATGGCAGTACGCAGTAAAGTCGTAGAAGGTCACGGACTTGCTGATGCATTGGGCCAATTTCCTAGTGTGTTTGACGAGC TATACCGCGCGATGGTTGCAGCTGGTGAAAAATCAGGTCACCTTGATACCGTGCTTAACCGCCTAGCCGACTACACAGAG CGCAGACAACAAACCCGCAGCCAAATTACACAAGCGATGATTTACCCATCGCTAATGCTGTTCTTTGCAATGGGTATCGT GTTGCTATTGTTAACAGTGGTTGTACCTAAAATTGTTGGGCAGTTCGACCACATGGGTCAAGACCTGCCGGGAATAACAC AGTTTCTTATTTCTATAAGTACCTGGCTGCAAAATTACGGCTTATTTATGCTTATTGGTATTGCCGTGCTTGTTGTCATT ATTCAGCGCGTGCTGCAGCAAAAGCACATGAAGCTACGCTACCACAGAGCGCTGTTAACCTTGCCGTTAATTGGCCGGGT GTCTCGCGGGCTCAATACCGCGCGTTTTGCACGTACCTTAAGTATTTTAAGTGCCAGTGCGGTTCCACTACTAGAAGCTA TGCGTATTTCAGGTGATGTGCTAGAAAATCAGCATATTAAAAACCAAGTGGCAGATGCAGCCATTAACGTTAAAGAAGGC AGCAGCCTGCGGGCAGCACTAGATAACACAAAAATGTTTCCACCAATGATGATGCATATGATTGCGTCTGGTGAAAAATC GGGTGAGCTACAGCAAATGCTAGCTCGCGCCGCAGATAATCAAGATAGGGAATTTGAAGCGCTTATTGGTGTCTCACTTA AGGTATTTGAACCCTTACTTATTGTATCGATGGCAGGCATTGTTCTGTTTATCGTTATGGCAATATTGCAACCAATTTTA GCATTGAACAACATGGTGAATATTTAA Protein sequence : MAAFAFKAVNARGKNTNGVLEGDNARQVRQQLREKGLIPLEVEQVAERAQSEGKGLSFSLFKPRISASDLALLTRQLATL VESALPVEEALLAVAEQCEKPRQKNMMMAVRSKVVEGHGLADALGQFPSVFDELYRAMVAAGEKSGHLDTVLNRLADYTE RRQQTRSQITQAMIYPSLMLFFAMGIVLLLLTVVVPKIVGQFDHMGQDLPGITQFLISISTWLQNYGLFMLIGIAVLVVI IQRVLQQKHMKLRYHRALLTLPLIGRVSRGLNTARFARTLSILSASAVPLLEAMRISGDVLENQHIKNQVADAAINVKEG SSLRAALDNTKMFPPMMMHMIASGEKSGELQQMLARAADNQDREFEALIGVSLKVFEPLLIVSMAGIVLFIVMAILQPIL ALNNMVNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 7e-88 | 54 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-86 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MASE_18935 | YP_006749827.1 | general secretion pathway protein F | VFG2049 | Protein | 2e-82 | 53 |
| MASE_18935 | YP_006749827.1 | general secretion pathway protein F | VFG0181 | Protein | 1e-84 | 50 |
| MASE_18935 | YP_006749827.1 | general secretion pathway protein F | VFG1870 | Protein | 2e-76 | 44 |
