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Name : MASE_18925 (MASE_18925) Accession : YP_006749825.1 Strain : Alteromonas macleodii ATCC 27126 Genome accession: NC_018632 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 4439562 - 4441613 bp Length : 2052 bp Strand : + Note : COG1450 Type II secretory pathway, component PulD DNA sequence : ATGAAAAGGCGCACTAGCCAAAAACTATTATCTCGCTTGAGCACAGCCATGTGTACAGCGCTTCTGTGTTTCTCGGTGAC GGCCGCTGAGTACATGCCTAATTTCAAAGATACTGACATCAACGAGTTTATTAATATTGTTGGTAAAAATCTTGAGCGCA CCATTATTGTCGACCCTAACGTACGTGGAAAAATAAGCGTACGCAGCTATGACATGCTCGATGAAGATCAGTACTACCAG TTTTTCCTAAACGTACTTCAAGTGTATGACTTTGCCGTTGTAGAAATGCCTAGCGGTATTTTAAAAGTGGTTCGCTCGAA AGACGCTAAAACATCCAATATTCCTGTTGTTGAAGGCGCTAATCGCGACGGCGATGAAATGATCACTCGCGTTGTGCCTG TTTATAACGTACCGGTGCGCGAACTTGCACCTATTTTACGTCAGCTAAATGACCAGGCGGGCGGCGGTAACGTAGTTAGC CACGACCCATCGAACGTAATGATGCTAACCGGCCGTGCTGCGGTAGTTAACCGACTAGTAGAAATTATCGAGCGCGTGGA CCGTGCCGGTGACGAAGAAGTAGAAATCGTTAAACTTCGCTATGCGTCAGCATCAGAAATGGTGCGCATTATTGACAGCA TTAATAAGTCGCAAGGAAAAGCTAATACAGGAACTAAGTCTGAGCCTCGCGTTGTGGCAGACGACAGAACTAACTCGGTT ATTGTGAGCGGCGATATTAAAGCACGCCAGCGTCTTATCAACCTTATTCAGCGCATGGATCAAGAGCTTGAATCAAACGG CAACACCCGCGTGCTGTTTCTTAACTACGCTAAAGCGGAAGATTTAGTAAAAGTATTGCAGGGCGTATCTGCTAGCATTC AAGCAGAAGAACAAGGCGGTGGCACTACATCGCGCCGAGCGGGTTCAAACCGTGAAATCAGCATTGATGCACATGAAGAT TCTAACGCCATTGTTATTACCGCAGAGCCGGACATGATGCGCTCATTAGAAGAGGTTGTACGCCAACTTGATATTCGCCG CGCGCAGGTACAAGTTGAAGCCATTATCGTTGAAGTCTTTGAAGGCGACGGCACTACATTGGGTGTGCAGTGGGCTTCTG AAGCCGGCGGCGGTACACAGTTCAGCAACGGTGTTGTACCGGTTGGATCATTGGCGGTAGCCCTTAAGCAAGCAGAAGAC GATACCGATACCGAAGCCTATGTAACAGATGATGGCGAAGTGGTCACAGTTAACACCACCGATGAAGGCGATTACACCGC ACTAGCGAGCCTTTTAGGCGGCGCTAACGGCCTTATTGCCGGCGTTATCGAAAATGGCTGGGGCGCGGTAGTACAAGCAG TAAGTACCGACACCAATTCAAATATTCTTGCCACACCTCACCTAACTACTATGGATAACGAAGAAGCGTTTTTCATTGTA GGTCAGGAAGTGCCTATTATCACAGGCACAACTACAGGGGCGAACAACTCTAACCCTTTCCAAACCGTTGACCGCCAAGA AGTGGGTATCAAACTTAAAGTTACACCACAAATCAACGAAGGCGACGCGGTACAGCTGCTTATCGAACAAGAAGTGTCTA GCGTAAGTGGCGCTACATCGGTAGATATTTCAATTAACAAGCGTGAAATTAAAACCACGGTGATTGTAGATGATGGCGGC ACTATTGTTCTTGGCGGTTTGATTGACGAAGACGTGCAAGAAAGTGAATCAAAAGTACCCTTGTTGGGTGACATTCCAAT ACTCGGTCACTTATTCAAATCGACATCAACCAGCAAGCGTAAGCGCAACTTGATGGTATTCTTAAAGCCGACTATCGTCC GCGACGGCGCAACAATGAACGCAATCAGCCATCGCAAATACAACTACATTCGCGCACTTCAGCTTAAACGCCAGCAAGAA GGTGTTTCGCTAATGCCTTATGAAGAGACGCCAAGCATTCCTCAATGGGATGATGCACTCGCTTTACCTCCTTCATTTGA AGAATACCTCTCGGAGAAAGAGAAGCAGAAACAAGAAGAAGGTAACGACTAA Protein sequence : MKRRTSQKLLSRLSTAMCTALLCFSVTAAEYMPNFKDTDINEFINIVGKNLERTIIVDPNVRGKISVRSYDMLDEDQYYQ FFLNVLQVYDFAVVEMPSGILKVVRSKDAKTSNIPVVEGANRDGDEMITRVVPVYNVPVRELAPILRQLNDQAGGGNVVS HDPSNVMMLTGRAAVVNRLVEIIERVDRAGDEEVEIVKLRYASASEMVRIIDSINKSQGKANTGTKSEPRVVADDRTNSV IVSGDIKARQRLINLIQRMDQELESNGNTRVLFLNYAKAEDLVKVLQGVSASIQAEEQGGGTTSRRAGSNREISIDAHED SNAIVITAEPDMMRSLEEVVRQLDIRRAQVQVEAIIVEVFEGDGTTLGVQWASEAGGGTQFSNGVVPVGSLAVALKQAED DTDTEAYVTDDGEVVTVNTTDEGDYTALASLLGGANGLIAGVIENGWGAVVQAVSTDTNSNILATPHLTTMDNEEAFFIV GQEVPIITGTTTGANNSNPFQTVDRQEVGIKLKVTPQINEGDAVQLLIEQEVSSVSGATSVDISINKREIKTTVIVDDGG TIVLGGLIDEDVQESESKVPLLGDIPILGHLFKSTSTSKRKRNLMVFLKPTIVRDGATMNAISHRKYNYIRALQLKRQQE GVSLMPYEETPSIPQWDDALALPPSFEEYLSEKEKQKQEEGND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-152 | 53 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-159 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MASE_18925 | YP_006749825.1 | general secretion pathway protein D | VFG2047 | Protein | 1e-149 | 53 |
