Gene Information

Name : MASE_16540 (MASE_16540)
Accession : YP_006749354.1
Strain : Alteromonas macleodii ATCC 27126
Genome accession: NC_018632
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3872470 - 3873657 bp
Length : 1188 bp
Strand : -
Note : COG1004 Predicted UDP-glucose 6-dehydrogenase

DNA sequence :
ATGGAAAGTACGTTAGCTAAGTACAAAATAGCAGTAGCAGGTACGGGTTATGTAGGGCTTTCAAATGCAGTACTACTTGC
ACAGCACAATGAAGTGAAAGCAGTCGACTTGGTACCCGAAAAAGTTGAAATGCTAAATAACAAAACGTCTCCTATTGAAG
ACAAAGAAATTTCAGAATACCTAACAACAAAAGAGCTTAACCTTGAAGCCACGTTAGATGCGCAAGTTGCTTATAAAGAT
GCCGACTATGTTGTTATTGCAACGCCAACCGATTACGACCCTCAAACTAACTACTTTAACACCGGTAGTGTAGAGGCAGT
TATCAAAACTGTGATGGAAATTAATCCTGATGCTGTAATGATTGTAAAATCGACTGTACCGGTAGGCTTTACTAAAGATG
CAAAAGCTCGTTTTGGTTCTGACAATATTATCTTTTCGCCTGAATTTTTGCGTGAAGGGAAAGCACTTTACGACAACCTT
TACCCAAGCCGTATTATCGTAGGTGAGCGTAGTGAGCGCGCGGAGGTTTTCGCAAAGCTGCTTCAGCAAGGTGCAATAAA
AGAGAACATCGATGTTTTATTCACCGACAGTACTGAGGCTGAAGCCATTAAACTTTTCGCCAACACGTACTTGGCAATGC
GCGTTGCGTACTTTAACGAACTAGATAGCTATGCAGAGCGTAATGGCCTAGACACCAAGCAGATCATTGAAGGTGTGGGC
TTAGACCCGCGTATCGGTAATCATTACAACAATCCAAGCTTCGGTTACGGTGGTTATTGCTTACCAAAAGATACCAAACA
GTTACTAGCTAACTACAGCGAAGTGCCTAATAATATGATTCAGGCCATTGTAGATGCTAACCGTACGCGTAAAGATTTTA
TCGCCGATTCAATTGTAAGCCGTGGCCCCAAGATTGTTGGTATCTATCGCCTTATCATGAAGTCTGGTTCTGATAACTTC
CGTGCAAGTGCTATTCAAGGCATTATGAAACGTATTAAGGCGAAAGGTATTGAAGTTGTAGTCTACGAGCCGGTGCTTAA
GGAAGAAGATTTCTTTAATTCACGCGTAGTAAACGACTTAGAAGAGTTTAAGAAAATTTCTGACGTTATCGTAGCCAACC
GTGTTACGGGCGATATCGAAGACGTACTAGATAAAGTATACAGTCGCGACTTGTTTAACGCCGACTAA

Protein sequence :
MESTLAKYKIAVAGTGYVGLSNAVLLAQHNEVKAVDLVPEKVEMLNNKTSPIEDKEISEYLTTKELNLEATLDAQVAYKD
ADYVVIATPTDYDPQTNYFNTGSVEAVIKTVMEINPDAVMIVKSTVPVGFTKDAKARFGSDNIIFSPEFLREGKALYDNL
YPSRIIVGERSERAEVFAKLLQQGAIKENIDVLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAERNGLDTKQIIEGVG
LDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYSEVPNNMIQAIVDANRTRKDFIADSIVSRGPKIVGIYRLIMKSGSDNF
RASAIQGIMKRIKAKGIEVVVYEPVLKEEDFFNSRVVNDLEEFKKISDVIVANRVTGDIEDVLDKVYSRDLFNAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-95 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MASE_16540 YP_006749354.1 nucleotide sugar dehydrogenase VFG0963 Protein 3e-104 57