Gene Information

Name : MASE_12425 (MASE_12425)
Accession : YP_006748554.1
Strain : Alteromonas macleodii ATCC 27126
Genome accession: NC_018632
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2895864 - 2897003 bp
Length : 1140 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
GTGAACCACGATACGGTTAAAAACGATTATTTTTGGATGGCAAAAGCCATTCAGCTTGCCCAACAAGGGCGTTTTACCAC
TTCTCCTAACCCTCGCGTAGGCTGTGTAATTGTTGACGAAAACAATCAATTGCTCGGTCAGGGATATCACATTCAAGCTG
GTACACCCCATGCCGAAGTGCATGCATTAAGACATGCATCTAACGCACGTCCGCAGGGCGCAAAGGGCGCGACGGCATAC
GTTACACTTGAACCTTGTAGTCATTTTGGGCGCACACCGCCTTGTGCTGTTGCCTTGGTAGAAGCAAAGGTAGCGCGTGT
TGTTATTGCTATGACCGACCCGAATCCAAACGTATGCGGTAACGGTATTAGCATTCTGCAGGAAGCAGGCATCGAAGTGG
TAAGCGAAGTGATGGCTGCTGAGGCCGCAGCGCTAAACCCTGGGTTTATTAAACGCATGCTTACCGGTGAGCCCTTTGTT
CGCGTGAAATTAGGCATTAGCCTAGATGGAAAAATAGCCCTTCAAAATGGGGTGAGTCAGTGGATTACTGGAGCAGAGGC
AAGACGGGATGTGCAACAGTATCGTGCACAAAGTTGCGTGGTGCTAACAGGCTCAGGTACGGTGAAAGCCGATAACCCTA
GTTTGTTGGTTAGAGAACAAGAAGCACAGTTCACTAATTATCCTCTGGAACACATTCGTCAACCTGCCCGTGTTGTTGTA
GATAGCAAAAGTAAGCTTACTAGAGACTACACACTTTTTAACGACGGCAATATTACGTTCACGGCGACGTCACAGGCTCA
CCCAGACACCGCTACTCAGCACTATCTCCAACTGGACGAAAAAGACGGTAAGCTCGACTTACATGCGCTAATGTCAGCAT
TGGGTGACAAGCAATACAATGAAGTCTGGGTGGAAGCAGGCCCTGGCCTTGCCGGTGCATTATTGCAAGAAGGGCTGGTG
GATGAACTTATTTGCTACCAAGCGCCTAAGCTTTTAGGTGATAAGGGAGTCAGTATGGTTAATTTACCCGCGTTCACGTC
GCTAAATGAATGTATTTCGCTTTCGCTTATTGAAAATCGTCAAGTGGGTAACGATATTAAGCTTATCTTCCGTCCTGATG
TTAGCAACATCCGTGGTTAA

Protein sequence :
MNHDTVKNDYFWMAKAIQLAQQGRFTTSPNPRVGCVIVDENNQLLGQGYHIQAGTPHAEVHALRHASNARPQGAKGATAY
VTLEPCSHFGRTPPCAVALVEAKVARVVIAMTDPNPNVCGNGISILQEAGIEVVSEVMAAEAAALNPGFIKRMLTGEPFV
RVKLGISLDGKIALQNGVSQWITGAEARRDVQQYRAQSCVVLTGSGTVKADNPSLLVREQEAQFTNYPLEHIRQPARVVV
DSKSKLTRDYTLFNDGNITFTATSQAHPDTATQHYLQLDEKDGKLDLHALMSALGDKQYNEVWVEAGPGLAGALLQEGLV
DELICYQAPKLLGDKGVSMVNLPAFTSLNECISLSLIENRQVGNDIKLIFRPDVSNIRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 9e-60 45
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 9e-60 45