Gene Information

Name : MASE_12300 (MASE_12300)
Accession : YP_006748531.1
Strain : Alteromonas macleodii ATCC 27126
Genome accession: NC_018632
Putative virulence/resistance : Unknown
Product : ClpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2873635 - 2876211 bp
Length : 2577 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAGACTAGATAGATTTACCAGTAAATTTCAGCTCGCAATATCCGATGCTCAATCACTCGCATTGGGGCGAGATCATCA
ATACATTGAACCTGTCCATTTAATGACTGCCATGCTAAATCAGCAAGGCGGGTCAGTACGCCCTTTGCTTGACCAAGCAA
ACATCAATGTAAATGCGCTACGCTCAGCACTGAGCCAAGCTATTGAGCGCCTACCTCGTATTGAAGGCATTGGGGGAGAT
GTTCAATTAAGTAAAGACAGCGGCATTTTGCTAAATCTTTGTGACAAGATAGCGCAGCAGCGAAAAGACGAATACATCAC
TTCAGAAATCTTTGTTCTAGCGGCGCTACAAGATAAAGGGCGCTTGGGGGAAATCCTCAAAAGCCTGAATATCACTAAAG
AAGCTATTGAAAGCGCAATAGACGACATGCGTGGTGGCCAGAAGGTCACGGATCCTAATGCTGAAGATGTACGTCAAGCG
CTTGAAAAATACACGACAGATTTAACCGAGCGAGCAGAACAAGGTAAGCTCGACCCGGTCATTGGTCGAGACGATGAGAT
TCGCAGAACTGTTCAAGTACTGCAGCGTCGAACCAAAAACAACCCAGTACTCATTGGTGAGCCGGGTGTGGGTAAAACGG
CTATTGTTGAAGGGTTGGCTCAGCGCATCATTAATGGCGAAGTGCCTGAGGGCTTAAAGAACAAGCGTGTTCTTGCCCTT
GATATGGGCGCGTTAGTGGCGGGAGCTAAATATCGCGGTGAGTTTGAAGAACGCCTTAAAGCAGTGCTTAATGAGCTGGC
TAAAGAAGAAGGCCGCGTGATCTTATTCGTTGACGAACTGCACACCATGGTAGGTGCAGGGAAGGGCGATGGAGCGATGG
ATGCAGGTAATATGCTTAAACCTGCGTTAGCCCGTGGTGAACTTCACTGCGTTGGTGCTACAACACTGGATGAATATCGT
CAGTACATTGAAAAAGACGCAGCACTTGAACGTCGTTTCCAAAAGGTATTAGTTGAAGAACCAAGCGTTGAAGACACTAT
TGCTATTCTGCGTGGCTTAAAAGAGCGCTATGAGCTCCATCACTCGGTAGATATTACTGATCCCGCTATCGTTGCAGCGG
CAAGTTTGTCGCATCGTTATATTAGCGACCGCCAATTGCCAGACAAAGCCATTGATCTTATAGACGAGGCTGCGTCTAGC
ATTCGATTGCAAATAGACTCCAAGCCCGAAGAGATGGATCGTCTAGAGCGTCGTATCATCCAGCTAAAATTGGAAGAGCA
AGCTCTGGCCAAAGAAACAGATGATGCGAGTCATAAGCGACTTGAGATGATTGAGTTAGAGCGTGAGCAAGCGGAAACCA
AGTACGCAGAGCTTGAGAAAGTGTGGTTGGATGAGAAAGACGCCATGCAGGGCACTCAAACCATTAAAGGGGAGCTTGAG
CAGGCTAAACTTGACTTGGAGATAGCGCGACGTGCATCTGATTTGAATCGTATGTCGGAACTTCAGTACGGCCGTATTCC
AGAGCTTGAAGCAAAGTTAGAGCAAGCGGCTGAAAACGAAACTCGCGAGACGACGTTACTTAAAAATAAAGTGACGGACG
TTGAAATTGCAGATGTGCTTTCGCGGTGGACGGGTATACCTGTAGCGCGAATGCTTGAGGGCGAGCGTGAGAAGTTGTTG
CGTATGGAAGACGTACTTCACAAACGGGTTGTTGGACAAGAAGAAGCGGTTGAAGCGGTTTCAAACGCAATTCGACGTTC
ACGTGCTGGGCTTGCGGATCCAAACCGACCTATTGGCTCATTCTTATTTTTAGGGCCAACTGGCGTGGGCAAAACTGAGC
TCTGCAAAGCCTTGGCAGGCTTTATGTTCGATACTGAAGATGCCATGGTGCGTATCGATATGTCAGAGTTTATGGAAAAA
CACTCGGTAGCACGCTTAGTGGGTGCACCTCCTGGCTATGTTGGCTACGAGGAAGGTGGCTATTTAACCGAAGCGGTGCG
TCGCAAGCCATACTCGGTCATTTTGTTGGACGAGGTTGAAAAGGCACATCCAGATGTATTCAATATTCTGCTTCAAGTAT
TGGATGACGGCCGGTTGACTGACGGACAAGGACGTACTGTAGATTTTAAAAATACCGTGGTGATCATGACGTCCAACTTA
GGCTCAGATATCATTCAAGATAAGCACAACGAAAGTCAGTATGACGATATGAAGGCGTCGGTAATGAGTGTTGTAGGGCA
ACACTTCAGACCGGAGTTCATCAACCGCGTCGATGATATTGTGGTATTCCATCCATTAGGGAAGGAGCAAATAAAATCTA
TTGCTAAAATTCAGCTTGCCTCGCTTCGCGCTAGGCTCGCAGAAAAAGGTTATAAGCTTACTCTGTCTGCCGCGGCTATG
GATAAATTGGCGGACGCGGGTTTCGATCCAGTGTTTGGCGCACGTCCGCTTAAGCGAGCGATACAAGTGCAGGTGGAAAA
TCCACTCGCGCATCAATTACTCGCTGGCGAATTAATACCGGAATCAACCATTCGTATTGATGCAGATGACAGCGGACTTT
TCGTTGTCAGCAATTAA

Protein sequence :
MRLDRFTSKFQLAISDAQSLALGRDHQYIEPVHLMTAMLNQQGGSVRPLLDQANINVNALRSALSQAIERLPRIEGIGGD
VQLSKDSGILLNLCDKIAQQRKDEYITSEIFVLAALQDKGRLGEILKSLNITKEAIESAIDDMRGGQKVTDPNAEDVRQA
LEKYTTDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLAL
DMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFVDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYR
QYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS
IRLQIDSKPEEMDRLERRIIQLKLEEQALAKETDDASHKRLEMIELEREQAETKYAELEKVWLDEKDAMQGTQTIKGELE
QAKLDLEIARRASDLNRMSELQYGRIPELEAKLEQAAENETRETTLLKNKVTDVEIADVLSRWTGIPVARMLEGEREKLL
RMEDVLHKRVVGQEEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAGFMFDTEDAMVRIDMSEFMEK
HSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNL
GSDIIQDKHNESQYDDMKASVMSVVGQHFRPEFINRVDDIVVFHPLGKEQIKSIAKIQLASLRARLAEKGYKLTLSAAAM
DKLADAGFDPVFGARPLKRAIQVQVENPLAHQLLAGELIPESTIRIDADDSGLFVVSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-102 42