|
Name : lysS (MASE_05465) Accession : YP_006747194.1 Strain : Alteromonas macleodii ATCC 27126 Genome accession: NC_018632 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1275521 - 1277089 bp Length : 1569 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGACTGACCAACAAACAGACGATAACAAATTGATTGCAGAGCGCCGTGCTAAGCTAAGCGCTATTCGCGAGCAGTGCCG TGCAAACGGTTTCCCAAACAGCTTCCGTCGCGAAAACTATGCGGATGAGCTTCAAGCTAAGTTCGGTGAATTCGACAAAG AAACGCTACAAGAGCAGGGTAACAAAGTAAGCATCGCTGGCCGTATTATGGCAAAGCGTGGTCCTTTCATGTTGCTTCAA GATATGACTGGCCGCATTCAGGCATACGCAGATAAAGACACGCAAAAAGCCCTTAAAGCAAAATATGGCGCACTAGATAT TGGCGACATTATTGGCGTGGCGGGTGACCTGCATAAGTCAGGTAAAGGCGACCTTTACGTGAACATGGAGCAATACGAGT TGCTAACCAAAGCACTTCGTCCATTGCCAGAAAAATTCCACGGTTTGAGTGACCAGGAAACGAAATATCGCCAGCGCTAC GTTGATTTGATCACAAGTGAACAAACGCGCAAAACGTTCATGATCCGTAGCAAGATCGTAAACGGTATTCGCAATTATCT TACCGAACGTGACTACCTTGAGGTAGAAACACCGATGCTTCAGGTTATTCCTGGCGGCGCGACAGCGAAGCCGTTTGTGA CTCACCACAATGCGTTAGACATCGATATGTACCTGCGTATTGCACCAGAGCTTTATCTTAAGCGCCTAGTGGTTGGTGGT TTTGAGCGTGTGTTCGAAATTAACCGTAACTTCCGTAATGAAGGCTTATCAACCCGTCACAACCCAGAGTTTACTATGCT TGAGTTCTATCAAGCGTATGCAGACTACAACGACCTGATGAACCTTACCGAAGATATGCTGCGCACGCTGGCAGAAGATA TTCTTGGTACAAGCATTATCAAAAACACAACTAAAGACGCTGAAGGTAACGTAACGTCTGAAGTTGAATACGATTTTGGT AAGCCGTTTGACCGCTTAAGTATGGGCGAAGCTATTCTTAAGTACTGGCCAGAAGCTAACGAAGAAGCTATTCGCGACCC AGAGGCGAACCTTGACGCGCTTAAAGCAATGGCAAAACAGCTTCACATTAAAGAGCCTGAAGTTGACGGCATTTGGGGTG CGGGTAAGTACCTTTGCGAAATCTTCGAAGCAACAGCAGAAGAGAAGCTTATCCAACCTACGTTTATTACAGAATATCCG TGGGAAGTATCGCCGCTTGCGCGCCGTAACGACAACAATCCATTCATTACAGACCGCTTCGAGTTCTTTGTAGGTGGACG TGAATTAGCGAATGGCTTTAGCGAGCTTAACGACCCAGAAGATCAGGCGGAACGTTTTGCAAAGCAGGTTGAAGAGAAAG ACGCTGGCGACGATGAAGCCATGCACTTTGACGATGACTACATCCGCGCCCTTGAATATGGCTTGCCGCCAACGGCGGGT GAAGGTATCGGGATTGACCGTCTAGCTATGCTATTTACTGATAGCTCAACAATTAAAGATGTTATCTTGTTCCCACACAT GAAGCCTCAGGCGCCAAAAGACGCGCAAGAAGCGGGCGAACAAGAATAA Protein sequence : MTDQQTDDNKLIAERRAKLSAIREQCRANGFPNSFRRENYADELQAKFGEFDKETLQEQGNKVSIAGRIMAKRGPFMLLQ DMTGRIQAYADKDTQKALKAKYGALDIGDIIGVAGDLHKSGKGDLYVNMEQYELLTKALRPLPEKFHGLSDQETKYRQRY VDLITSEQTRKTFMIRSKIVNGIRNYLTERDYLEVETPMLQVIPGGATAKPFVTHHNALDIDMYLRIAPELYLKRLVVGG FERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSIIKNTTKDAEGNVTSEVEYDFG KPFDRLSMGEAILKYWPEANEEAIRDPEANLDALKAMAKQLHIKEPEVDGIWGAGKYLCEIFEATAEEKLIQPTFITEYP WEVSPLARRNDNNPFITDRFEFFVGGRELANGFSELNDPEDQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPTAG EGIGIDRLAMLFTDSSTIKDVILFPHMKPQAPKDAQEAGEQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-131 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006747194.1 | lysyl-tRNA ligase | VFG1668 | Protein | 8e-132 | 55 |
