Gene Information

Name : C269_03045 (C269_03045)
Accession : YP_006744938.1
Strain : Leuconostoc gelidum JB7
Genome accession: NC_018631
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit ClpE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 637342 - 639405 bp
Length : 2064 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGCATCACAAGACCCATTTGGATTTGGCAATATTAATTTTGATGAAATGATGCGTGCAATGAACGAACAAATGCAGTC
TGCACAACCTGACAATCAAGCTAATATTAACCAACAACAGAATAAAAAAGATAAAACTAAAAAAAGACCTACCTTACTAG
AAGAATATGGAATTAACCTTACACAACAAGCACGTGATGGTAAGCTTGATCCAGTAATTGGCCGTGATTTAGAAGTTGCG
CGTACGATTGAAATACTTAACCGTCGAACAAAAAATAACCCTGTTCTCATTGGCGAACCTGGTGTCGGTAAAACAGCGGT
AGTTGAAGGTTTAGCGCAAGCAATTGTTGAAAACAAAGTGCCTGAGAAATTACGTTCTAAAGACGTCATTCGTTTAGCCA
TGTCTGCTATGGTTCAAGGCACTGCTATGCGCGGACAATTTGAAGCGCGTATGCGGCAATTAATGAAAGAAGTAGCCGAC
AATGATGATGTGATTTTATTCATTGATGAAGTTCACGAGATTATGGGCGCTGGTAATGCGGAAGGCGGTATGGACGCCGG
CAATATCTTAAAGCCAGCCTTAGCTCGTGGCGAATTCCAACTCATTGGTGCCACGACCTTAAATGAATATCGTAAAATAG
AAAAAGATGGCGCAATCGCACGCCGTTTTCAACCTGTTCAAATTGAAGAACCATCAAAAGAGGCTACAATTCAAATATTG
AAGGGTATTCAACAACGTTACGAGGCATACCATCATGTCACTTTTACCAATGATGCCATAACTGCTGCTGTTGAATTATC
GGATCGTTATGTCCCTGAACGATTTTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGGCTCTCGTAAAAATTTGA
CCATGACAATTGCCGATCCAAAAGCAATTCAAACAAAAATAGATGCTGCCGATCAATTGAAGCAAGACGCAATTGACAAA
GAAGATTTTGAAAAAGCAAGCTACTGGCGTGATCAAACCAATCAGCTCGAATCTCAAAAAGCTCAAGTTGAAGCGCACCC
AGAGATGTTCAAACCACAATCTGTGACCGAAAAAGATATTCTTAAAATCATTGAAGATAAAACAGATATACCAGTTGGCG
ATTTAAAAGATAATGAAGCCAATCAGTTACAAGAACTAGACAACCAATTGGCTCAACATGTTATTGGACAAGACATTGCC
GTTCAGACAGTTGCCAAAGCCATTCGCCGTAATCGCATTGGTCTGACGAAATCAGGTCGTCCAATTGGCTCATTCTTATT
CGTTGGTCCTACTGGTGTCGGAAAAACTGAATTAGCTAAGCAACTAGCACAAGAAATGTTTGGCAGTAAAGACGCCTTAA
TTCGTTTCGACATGTCTGAATACATGGAAAAACACGCTATTTCCAAAATGATCGGTGCCCCAGCTGGCTATGTTGGCTAC
GAAGAAGCTGGTCAACTAACTGAGCAAGTAAGACGTCATCCTTATTCACTGATTTTAATTGATGAGGTTGAAAAAGCGCA
TCCTGATGTGACGAATATGTTCTTACAAATTTTAGACGACGGTCGCTTGACTGATGCACAAGGTCATGTTGTCAGCTTCA
AAGATACTGTTATCATTATGACTTCAAATGCTGGTTCAACTGATACTGGTAACGTTCCAATGGGATTTAATCAGCTAGAC
GCACAAAACAAATTATTACAACGTTTAGAAAATTATTTCCGACCCGAATTTTTAAATCGTTTTGACGATATTATTGAATT
TGAACAATTATCAAAGACAAATCTCTTAACAATCGTCGATCTCATGTTAGCAGATATGAACAATAATTTAGCTGATAATA
ATTTACATGTTAGTGTGAGTGACGCGGCAAAGTTAAAATTGGTAGCACTTGGTTATAACCCCGCTCTTGGCGCGCGACCA
CTACGTCGTGTTTTACAAGATAAAATTGCAGATCACTTAGCTGATTATTATCTAGCACATCCTGAAGTAACAGATCTATA
TGCAGATATTGATGTTGATACAGATGATATCATTATTTCTCAAAAAGAATACATCAAGGCATAA

Protein sequence :
MASQDPFGFGNINFDEMMRAMNEQMQSAQPDNQANINQQQNKKDKTKKRPTLLEEYGINLTQQARDGKLDPVIGRDLEVA
RTIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQAIVENKVPEKLRSKDVIRLAMSAMVQGTAMRGQFEARMRQLMKEVAD
NDDVILFIDEVHEIMGAGNAEGGMDAGNILKPALARGEFQLIGATTLNEYRKIEKDGAIARRFQPVQIEEPSKEATIQIL
KGIQQRYEAYHHVTFTNDAITAAVELSDRYVPERFLPDKAIDLIDEAGSRKNLTMTIADPKAIQTKIDAADQLKQDAIDK
EDFEKASYWRDQTNQLESQKAQVEAHPEMFKPQSVTEKDILKIIEDKTDIPVGDLKDNEANQLQELDNQLAQHVIGQDIA
VQTVAKAIRRNRIGLTKSGRPIGSFLFVGPTGVGKTELAKQLAQEMFGSKDALIRFDMSEYMEKHAISKMIGAPAGYVGY
EEAGQLTEQVRRHPYSLILIDEVEKAHPDVTNMFLQILDDGRLTDAQGHVVSFKDTVIIMTSNAGSTDTGNVPMGFNQLD
AQNKLLQRLENYFRPEFLNRFDDIIEFEQLSKTNLLTIVDLMLADMNNNLADNNLHVSVSDAAKLKLVALGYNPALGARP
LRRVLQDKIADHLADYYLAHPEVTDLYADIDVDTDDIIISQKEYIKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-151 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C269_03045 YP_006744938.1 ATP-dependent Clp protease ATP-binding subunit ClpE VFG0080 Protein 0.0 58
C269_03045 YP_006744938.1 ATP-dependent Clp protease ATP-binding subunit ClpE VFG0079 Protein 4e-155 52