Gene Information

Name : C269_01530 (C269_01530)
Accession : YP_006744639.1
Strain : Leuconostoc gelidum JB7
Genome accession: NC_018631
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit ClpL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 321442 - 323565 bp
Length : 2124 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGCTAATGACAATTTTTTAAATGATCCATTCGGATCAGATATGAACAATATTTTTAATAATATGATGGGTAATATGAA
CGGTTATAATTCTGAAAACCGGCGTTATCTTATCAATGGACAAGAAGTGACACCTGAGCAGTTTGCGCAATATCGTCAAA
GCGGACAGTTGCCTCAGGGTCAACAGGCAACAATTAATGGGGATAGCGCTGGTCGACAGGTAGCTCAGTCGCAAGGACAA
CCTAAGCAGGAAGGTATATTAGCTAAGTTGGGCCGTAATTTGACACAAGAAGCACGTGATGGTTTGCTTGATCCAGTGAT
TGGTCGTAACAAGGAGATTCAAGAGACTGCAGAAATTTTGGGTCGCCGTACGAAGAATAATCCAGTATTAGTTGGCGATG
CTGGTGTTGGTAAAACAGCTGTCGTTGAAGGTCTGGCACAAGCAATTGTGACAGGTGATGTACCTGCTGCTATTAAAGAT
AAAGAAATTTATTCGATTGATATTTCAAGTTTAGAGGCAGGTACGCAATTCCGTGGTGCTTTCGAAGAGAATATTCAAAA
CTTGATGAAAGAAGTTAAATCAGCAGGGAATGTTATCTTATTCTTTGATGAAATTCATCAAATTTTGGGCGCTGGTTCTA
CTGGCGGTGAAGATGGGGGCAAAGGTTTGGCTGATATTATCAAACCTGCCTTGAGTCGAGGTGAAATTTCGCTAATTGGT
GCGACAACTCAAGATGAATATCGTAACACTATTATGAAAAATGCTGCTTTGGCACGTCGATTTAATGAAGTTACTGTTAA
TGCGCCATCTGCCAAGGATACGCTACAAATTTTAAAAGGTATTGCTGCATTGTATGAAACGCACCATCATGTTTCCTTAC
CAGAGGATGTGTTGAAGGCTGCTGTTGATTACGCGGTACAATATATTCCACAACGTTCGCTGCCTGATAAGGCGATAGAT
TTGTTGGATATGACGGCAGCTCATTTGAGTGCTAAAAATCCAGTAACAGACAAAGTTAGTTTAGAAAAGCAATTGCATGA
CACCAAAGCAAAGCAGGAAAAGGCTGTTGCAGACGAGGATTTTGAAGCTGCATTAAAACATAAAAATACAATTGCTGAGT
TAGAACAGAAAATTGCCGGGGCAGATGAAGCGACCAAAGTTGTTGCCACTGCTAATGATGTGGCAGAGTCTGTTGAACGT
TTAACAGGTATTCCAGTCGCACAAATGGGTGCTTCTGATATTGAACGTTTGAAGACAATCGGCGATCGTCTGGCTGGTAA
AGTTATCGGACAAGAGGACGCAGTTAATATGGTTGCACGTGCTATTCGTCGTAACCGTGCGGGATTTGACGAAGGAAATC
GACCAATTGGTAGTTTCTTATTTGTTGGTCCAACAGGTGTTGGAAAGACAGAGTTAGCTAAGCAACTAGCGCTAGATATG
TTTGGTAGCAAAGATAACATTGTACGATTAGATATGTCAGAGTATTCAGACTTGACAGCAGTTTCAAAGTTAATTGGGAC
TACTGCTGGCTATGTTGGATATGATGATAACAGTAACACGCTAACAGAAAAAGTGCGTCGTAATCCTTATTCTATTGTCT
TACTTGATGAAATTGAAAAGGCAAATCCACAAATTTTAACATTATTACTACAAGTAATGGATGATGGTCGACTCACTGAT
GGTCAAGGTAACGTTGTTAATTTCAAAAATACAGTGATTATTGCAACTTCAAATGCCGGTTTTTCAGATAAGAGCGATGG
TGAACTCATGGCGCGTTTGGCACCTTACTTCCGTCCGGAATTCTTAAACCGTTTTAATGGGGTGATTGAATTTTCAACTT
TGAGTAAAGATGATCTCAAGCAAATTGTTAATTTAATGCTAGCTGATGTGAGTCAGACATTAGCTAAGAAAGATTTGACT
TTGCAGGTGTCTGACGCTGTTAAAAATCATTTGATTGAAGATGGTTATGATGAAGCGATGGGTGCACGACCACTCCGTCG
TGTTATTGAACAACAAATTCGTGATCAAGTCACTGACTTTTACCTTGATAGCCCTGGCGAGAAAGAACTTAGTGCAGACT
TAATTGATGATCAAGTTGTGATTTCAGCTATTATTAAAAAATAA

Protein sequence :
MANDNFLNDPFGSDMNNIFNNMMGNMNGYNSENRRYLINGQEVTPEQFAQYRQSGQLPQGQQATINGDSAGRQVAQSQGQ
PKQEGILAKLGRNLTQEARDGLLDPVIGRNKEIQETAEILGRRTKNNPVLVGDAGVGKTAVVEGLAQAIVTGDVPAAIKD
KEIYSIDISSLEAGTQFRGAFEENIQNLMKEVKSAGNVILFFDEIHQILGAGSTGGEDGGKGLADIIKPALSRGEISLIG
ATTQDEYRNTIMKNAALARRFNEVTVNAPSAKDTLQILKGIAALYETHHHVSLPEDVLKAAVDYAVQYIPQRSLPDKAID
LLDMTAAHLSAKNPVTDKVSLEKQLHDTKAKQEKAVADEDFEAALKHKNTIAELEQKIAGADEATKVVATANDVAESVER
LTGIPVAQMGASDIERLKTIGDRLAGKVIGQEDAVNMVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDM
FGSKDNIVRLDMSEYSDLTAVSKLIGTTAGYVGYDDNSNTLTEKVRRNPYSIVLLDEIEKANPQILTLLLQVMDDGRLTD
GQGNVVNFKNTVIIATSNAGFSDKSDGELMARLAPYFRPEFLNRFNGVIEFSTLSKDDLKQIVNLMLADVSQTLAKKDLT
LQVSDAVKNHLIEDGYDEAMGARPLRRVIEQQIRDQVTDFYLDSPGEKELSADLIDDQVVISAIIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 9e-133 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C269_01530 YP_006744639.1 ATP-dependent Clp protease ATP-binding subunit ClpL VFG0080 Protein 2e-153 49
C269_01530 YP_006744639.1 ATP-dependent Clp protease ATP-binding subunit ClpL VFG0079 Protein 2e-136 45