Gene Information

Name : HMPREF1038_00960 (HMPREF1038_00960)
Accession : YP_006743142.1
Strain : Streptococcus pneumoniae gamPNI0373
Genome accession: NC_018630
Putative virulence/resistance : Unknown
Product : transposase, IS4 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 877473 - 877937 bp
Length : 465 bp
Strand : -
Note : Psort location: Cytoplasmic, score: 8.87

DNA sequence :
ATGCGACGGAAGTACAAATCAATCGCCCTAAGAAAACAATTAGCGAATCATTCTGGTAAAAAGAAATTTCACGCTATGAA
GGCTCAAGCGATTGTCACAAGTCAAGGGAGAATTGTTTCTTTGGATATCGCTGTGAACTATAGTCATGATATGAAGTTGT
TCAAAATGAGTTGTAGAAATATCGGACAAGCTGGTAAAATCTTGGCCGACAGTGGTTATCAAGGGCTCATGAAGATATAT
CCTCAAGCACAAACTCCACGTAAATCCAGCAAACTCAAGCCGCTAACAGCTGAAGATAAAGCCTGTAACCATGCGCTATC
TAAGGAGAGAAGCAAGGTTGAGAACATCTTTGCCAAAGTAAAAACGTTTAAAATGTTTTCAACAACCTATCGAAATCATC
GTAAACGCTTCGGATTACGAATGAATTTGATTGCTGGTATTATCAATCATGAACTAGGATTCTAG

Protein sequence :
MRRKYKSIALRKQLANHSGKKKFHAMKAQAIVTSQGRIVSLDIAVNYSHDMKLFKMSCRNIGQAGKILADSGYQGLMKIY
PQAQTPRKSSKLKPLTAEDKACNHALSKERSKVENIFAKVKTFKMFSTTYRNHRKRFGLRMNLIAGIINHELGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1693 YP_003446795.1 transposase orfB, IS1381 Not tested The aminoglycoside resistance gene cluster Protein 2e-50 91