Gene Information

Name : dexB (HMPREF1038_00390)
Accession : YP_006742590.1
Strain : Streptococcus pneumoniae gamPNI0373
Genome accession: NC_018630
Putative virulence/resistance : Unknown
Product : glucan 1,6-alpha-glucosidase
Function : -
COG functional category : -
COG ID : -
EC number : 3.2.1.70
Position : 339682 - 341289 bp
Length : 1608 bp
Strand : +
Note : KEGG: spr:spr0310 3.0e-297 dexB; alpha, 1-6-glucosidase K01215; Psort location: Cytoplasmic, score: 9.98

DNA sequence :
ATGCAAGAAAAATGGTGGCATAATGCCGTAGTCTATCAAGTCTATCCAAAGAGTTTTATGGATAGTAATGGAGATGGAAT
TGGCGATTTGCCAGGAATTACCAGTAAGTTGGACTATCTAGCCAAGCTAGGAATCACAGCAATTTGGCTTTCTCCCGTTT
ATGACAGCCCTATGGATGATAATGGCTACGATATTGCTGATTATCAAGCGATTGCGGCTATTTTTGGAACCATGGAGGAC
ATGGATCAGCTGATTGCAGAAGCTAAGAAGCGTGATATCCGTATCATCATGGACTTGGTGGTCAATCATACCTCGGATGA
GCATGCCTGGTTTGTAGAGGCCTGTGAAAATCCTAATAGCCCTGAGCGAGACTACTATATCTGGCGGGATGAGCCTAACG
ATTTAGATTCTATCTTTAGTGGGTCTGCTTGGGAATACGATGAAAAGTCAGGTCAATACTATCTCCACTTTTTCAGCAAG
AAACAGCCGGATCTCAACTGGGAAAATGAAAAACTTCGCCAGAAAATTTATGAGATGATGAACTTCTGGATTGATAAGGG
TATTGGTGGTTTCCGTATGGATGTTATTGACATGATTGGCAAAATTCCTGACGAGAAGGTAGTCAATAATGGTCCTATGC
TCCATCCCTATCTCAAGGAAATGAATCAGGCGACCTTTGGAGATAAGGATCTCTTGACAGTAGGGGAGACTTGGGGAGCA
ACGCCAGAGATTGCCAAGCTCTACTCTGATCCAAAGGGGCAAGAATTGTCTATGGTCTTCCAGTTTGAACATATCGGTCT
TCAGTATCAGGAAGGTCAGCCTAAATGGCACTATCAAAAAGAGCTGAATATCGCTAAGTTAAAAGAAATCTTCAACAAAT
GGCAGACAGAGTTAGGAGTTGAGGACGGCTGGAATTCCCTCTTCTGGAACAACCATGACCTCCCTCGTATTGTCTCAATC
TGGGGAAATGACCAAGAATACCGCGAAAAATCTGCCAAAGCCTTTGCAATCTTGCTTCATCTTATGAGAGGAACTCCTTA
TATCTACCAAGGTGAGGAGATTGGGATGACCAACTATCCGTTTGAAACACTGGATCAAGTAGAAGATATTGAATCTCTCA
ACTATGCGCGTGAGGCTCTTGAAAAAGGTGTTCCGATTGAAGAAATCATGGACAGTATCCGTGTTATTGGACGTGACAAT
GCCCGTACCCCTATGCAATGGGACGAGAGCAAAAACGCTGGTTTCTCAACAGGTCAACCTTGGTTGGCGGTTAATCCAAA
TTACGAGATGATCAATGTCCAAGAAGCGCTGGCAAATCCAGATTCTATTTTCTATACCTATCAGAAACTGGTCCAAATTC
GCAAGGAGAATAGCTGGCTAGTTCGAGCTGACTTTGAATTGCTTGATACGGCTGATAAGGTCTTTGCTTATATACGTAAG
GATGGCGACCGTCGCTTCCTAGTTGTGGCTAACTTGTCCAATGAAGAGCAAGACTTGACAGTAGAAGGAAAAGTCAAATC
TGTCTTGATTGAAAACACCCTAGCTCAAGAAGTCTTTGAAAAACAAATCTTAGTTCCATGGGATGCTTTCTGTGTGGAAT
TACTATAA

Protein sequence :
MQEKWWHNAVVYQVYPKSFMDSNGDGIGDLPGITSKLDYLAKLGITAIWLSPVYDSPMDDNGYDIADYQAIAAIFGTMED
MDQLIAEAKKRDIRIIMDLVVNHTSDEHAWFVEACENPNSPERDYYIWRDEPNDLDSIFSGSAWEYDEKSGQYYLHFFSK
KQPDLNWENEKLRQKIYEMMNFWIDKGIGGFRMDVIDMIGKIPDEKVVNNGPMLHPYLKEMNQATFGDKDLLTVGETWGA
TPEIAKLYSDPKGQELSMVFQFEHIGLQYQEGQPKWHYQKELNIAKLKEIFNKWQTELGVEDGWNSLFWNNHDLPRIVSI
WGNDQEYREKSAKAFAILLHLMRGTPYIYQGEEIGMTNYPFETLDQVEDIESLNYAREALEKGVPIEEIMDSIRVIGRDN
ARTPMQWDESKNAGFSTGQPWLAVNPNYEMINVQEALANPDSIFYTYQKLVQIRKENSWLVRADFELLDTADKVFAYIRK
DGDRRFLVVANLSNEEQDLTVEGKVKSVLIENTLAQEVFEKQILVPWDAFCVELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 1e-118 50