Gene Information

Name : HMPREF1038_01900 (HMPREF1038_01900)
Accession : YP_006744019.1
Strain : Streptococcus pneumoniae gamPNI0373
Genome accession: NC_018630
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1739555 - 1739950 bp
Length : 396 bp
Strand : -
Note : KEGG: shn:Shewana3_3590 6.0e-15 single-strand binding protein K00655; Psort location: Cytoplasmic, score: 8.87

DNA sequence :
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Protein sequence :
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-19 50
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 1e-22 49
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 9e-23 49
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-17 48
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 3e-19 48
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 5e-19 47
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 9e-19 46
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-18 45
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 7e-20 43
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 1e-19 43
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 2e-12 41