Gene Information

Name : psaA (HMPREF1038_01634)
Accession : YP_006743784.1
Strain : Streptococcus pneumoniae gamPNI0373
Genome accession: NC_018630
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1497162 - 1498091 bp
Length : 930 bp
Strand : +
Note : KEGG: pfa:PF11_0270 0.0017 threonine -- tRNA ligase, putative K01868

DNA sequence :
ATGAAAAAATTAGGTACATTACTCGTTCTCTTTCTTTCTGCAATCATTCTTGTAGCATGTGCTAGCGGAAAAAAAGATAC
AACTTCTGGTCAAAAACTAAAAGTTGTTGCTACAAACTCAATCATCGCTGATATTACTAAAAATATTGCTGGTGACAAAA
TTGACCTTCATAGTATCGTTCCGATTGGGCAAGACCCACACGAATACGAACCACTTCCTGAAGACGTTAAGAAAACTTCT
GAGGCTGATTTAATTTTCTATAACGGTATCAACCTTGAAACAGGTGGCAATGCTTGGTTTACAAAATTGGTAGAAAATGC
CAAGAAAACTGAAAACAAAGACTACTTCGCAGTCAGCGACGGCGTTGATGTTATCTACCTTGAAGGTCAAAATGAAAAAG
GAAAAGAAGACCCACACGCTTGGCTTAACCTTGAAAACGGTATTATTTTTGCTAAAAATATCGCCAAACAATTGAGCGCC
AAAGACCCTAACAATAAAGAATTCTATGAAAAAAATCTCAAAGAATATACTGATAAGTTAGACAAACTTGATAAAGAAAG
TAAGGATAAATTTAATAAGATCCCTGCTGAAAAGAAACTCATTGTAACCAGCGAAGGAGCATTCAAATACTTCTCTAAAG
CCTATGGTGTTCCAAGTGCCTACATCTGGGAAATCAATACTGAAGAAGAGGGAACTCCTGAACAAATCAAGACCTTGGTT
GAAAAACTTCGCCAAACAAAAGTTCCATCACTCTTTGTAGAATCAAGTGTGGATGACCGTCCAATGAAAACTGTTTCTCA
AGACACAAACATCCCAATCTACGCACAAATCTTTACTGATTCTATCGCAGAACAAGGTAAAGAAGGCGACAGCTACTACA
GCATGATGAAATACAACCTTGACAAGATTGCTGAAGGATTGGCAAAATAA

Protein sequence :
MKKLGTLLVLFLSAIILVACASGKKDTTSGQKLKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDVKKTS
EADLIFYNGINLETGGNAWFTKLVENAKKTENKDYFAVSDGVDVIYLEGQNEKGKEDPHAWLNLENGIIFAKNIAKQLSA
KDPNNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLV
EKLRQTKVPSLFVESSVDDRPMKTVSQDTNIPIYAQIFTDSIAEQGKEGDSYYSMMKYNLDKIAEGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 6e-105 78
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 5e-105 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
psaA YP_006743784.1 manganese ABC transporter substrate-binding protein VFG1359 Protein 6e-132 99
psaA YP_006743784.1 manganese ABC transporter substrate-binding protein VFG2165 Protein 2e-81 58
psaA YP_006743784.1 manganese ABC transporter substrate-binding protein VFG2157 Protein 6e-76 53