Gene Information

Name : psaC (HMPREF1038_01633)
Accession : YP_006743783.1
Strain : Streptococcus pneumoniae gamPNI0373
Genome accession: NC_018630
Putative virulence/resistance : Resistance
Product : manganese ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1496282 - 1497130 bp
Length : 849 bp
Strand : +
Note : KEGG: msm:MSMEG_4171 0.0088 ribose transport system permease protein RbsC; Psort location: CytoplasmicMembrane, score: 10.00

DNA sequence : 
ATGATTGCAGAATTTATCGATGGATTGCAAAAATTCCATTTCCTACAAAATGCCTTGATAACAGCTATTGTCGTCGGGAT
TGTAGCTGGAGCTGTGGGATGTTTCATTATTCTACGCGGGATGTCACTCATGGGAGATGCCATTTCACATGCTGTCTTAC
CAGGTGTAGCCCTCTCCTTCATCTTGGGCCTTGACTTCTTTATCGGAGCCATTGTCTTTGGATTGCTAGCTGCCATCATC
ATTACCTACATCAAAGGAAACTCGATTATCAAAAGCGATACCGCCATCGGCATTACCTTTTCTTCTTTCTTAGCCCTCGG
TATCATCTTGATTGGTGTCGCTAAAAGTTCAACTGACCTTTTCCATATCCTTTTTGGTAATATTCTGGCCGTCCAAGATA
CGGATATGTTTATTACTATGGGTGTGGGGGCAGCCATCCTCTTGTTAATTTGGATTTTCTTCAAGCAACTCTTGATAACT
TCCTTTGATGAACTCTTGGCTAAAGCCATGGGAATGCCTGTCAATTTCTATCACTACCTTCTCATGGTACTCCTGACTCT
CGTGTCTGTGACAGCCATGCAAAGTGTCGGAACTATCCTGATTGTAGCCATGCTGATTACCCCAGCTGCAACTGCTTATC
TGTATGCTAATAGTCTGAAAAGTATGATTTTCCTTTCCTCAACCTTCGGAGCTACTGCTTCAGTTTTGGGACTCTTTATT
GGCTATAGTTTTAATGTTGCGGCAGGTTCTAGTATCGTGCTTACAGCTGCTAGTTTCTTTCTCATTAGCTTCTTTATCGC
TCCCAAACAACGATATTTGAAACTGAAAAATAAACATTTGTTAAAATAA

Protein sequence : 
MIAEFIDGLQKFHFLQNALITAIVVGIVAGAVGCFIILRGMSLMGDAISHAVLPGVALSFILGLDFFIGAIVFGLLAAII
ITYIKGNSIIKSDTAIGITFSSFLALGIILIGVAKSSTDLFHILFGNILAVQDTDMFITMGVGAAILLLIWIFFKQLLIT
SFDELLAKAMGMPVNFYHYLLMVLLTLVSVTAMQSVGTILIVAMLITPAATAYLYANSLKSMIFLSSTFGATASVLGLFI
GYSFNVAAGSSIVLTAASFFLISFFIAPKQRYLKLKNKHLLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 7e-82 79
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 5e-82 79

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
psaC YP_006743783.1 manganese ABC transporter permease BAC0442 Protein 5e-34 41