Gene Information

Name : B602_0501 (B602_0501)
Accession : YP_006737379.1
Strain : Chlamydia psittaci M56
Genome accession: NC_018623
Putative virulence/resistance : Virulence
Product : type III secretion , HrcV family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 511231 - 513303 bp
Length : 2073 bp
Strand : -
Note : -

DNA sequence :
ATGATCAACAAATCGAGTGACCTCATCCTTGCCTTATGGATGATCGGTGTCGTTTTGATGATCATCTTGCCCCTACCTCC
GACTATTGTCGACTTGATGATCACTATCAATTTAGCTGTTTCTGTCTTCTTATTGATGGTGGCTTTGTACATTCCTAGCG
CTTTACAATTATCGGTGTTCCCCTCGCTACTCCTAATCACAACAATGTTTCGATTAGGTATTAACATTTCTTCTTCTAGA
CAGATTCTTCTTAAAGCTTATGCCGGTCACGTCATTCAAGCTTTCGGAGACTTCGTAGTTGGAGGGAACTATGTTGTTGG
ATTTATTATCTTCTTAATTATTACGATTATTCAATTTATCGTTGTTACCAAGGGTGCTGAGCGTGTTGCTGAAGTAGCTG
CAAGATTCCGATTAGATGCTATGCCTGGTAAGCAAATGGCTATTGATGCTGACTTGCGTGCCGGAATGATTGATGCACAA
CAAGCCCGCGATAAACGAGGCATGATTCAAAAGGAAAGTGAACTCTATGGAGCCATGGACGGTGCCATGAAGTTCATTAA
AGGGGACGTTATCGCAGGTATTGTGATCTCGTTAATTAACATTGTCGGTGGTTTGACTATTGGTGTGGCTATGCACGGCA
TGGACCTAGCTCAAGCTGCTCACGTATACACTCTGTTATCTATCGGTGATGGTTTAGTTTCTCAGATTCCTTCACTACTG
ATTTCCTTAACTGCTGGTATCGTTACTACTCGAGTTTCTAGTGATAAAAACACGAACTTAGGTAAAGAGATTTCCTCTCA
GTTAGTTAAAGAACCTAGAGCTTTACTCTTAGCCTCTGCAGCAACTTTAGGCGTGGGCTTTTTTAAAGGGTTCCCACTTT
GGTCATTCTCCATACTCTCTCTTATCTTTGGTATTCTTGGTGTTATCCTTCTTGCGAAGAAAAACAGTGCTTCTAAACAG
GGTGCCTCTGGAGCATCAACAACAGTAGGAGCTGCTTCAGACGGAGCTGCAGCAGCTGGAGATAACCCGGATGATTACTC
CTTAACGTTGCCAGTAATTTTAGAATTAGGAAAAGACTTATCTAAGTTGATTCAACAAAAAACGAAGTCTGGTCAAAGTT
TCGTTGACGATATGATCCCGAAAATGCGTCAAGCTTTGTATCAAGATATTGGTATTCGTTACCCAGGAATTCATGTGCGC
ACTGACTCTCCTTCTCTAGAGGGTTATGATTACATGATTCTTCTTAATGAAGTTCCCTACGTTCGAGGAAAAATTCCTGC
AAACCATGTGTTAACTAACGAAGTTGAAGAAAATCTTAAGAGATACAATCTTCCTTTCCTTACTTATAAAAATGCTGCGG
GTCTCCCTTCTGCTTGGGTTAGTGAAGATGCTAAAGCTATTCTAGAAAAAGCAGCTATTAAGTATTGGACACCTTTAGAG
GTGATTATTCTTCATCTGTCTTACTTCTTCCATAGAAGCTCCCAAGAATTCTTAGGAATTCAAGAGGTACGCTCTATGAT
TGAATTTATGGAACGCTCGTTCCCAGATCTTGTTAAAGAAGTTACGCGACTTATCCCTCTGCAAAAGCTTACTGAAATTT
TCAAACGTTTAGTCCAAGAGCAGATCTCTATCAAAGACCTACGTACAATTTTAGAATCCTTAAGTGAATGGGCTCAAACT
GAAAAAGATACTGTATTGCTAACTGAATACGTACGTTCTTCTCTGAAACTTTACATTAGTTTCAAATTTTCCCAAGGACA
ATCTGCAATCTCAGTTTATTTACTCGATCCAGAAATTGAAGAGATGATCCGTGGAGCCATTAAACAAACCTCTGCAGGAT
CTTATCTTGCTTTGGATCCTGATTCTGTAAACCTAATCTTAAAATCTATGAGAAATACAATTACGCCAACTCCTCCAGGA
GGTCAGCCTCCTGTGCTGTTGACAGCAATTGACGTAAGACGATATGTAAGGAAATTAATAGAAACAGAATTCCCTGATAT
CGCTGTGATTTCTTACCAAGAGATTCTCCCAGAGATTCGCATCCAGCCATTAGGAAGAATTCAGATTTTCTAA

Protein sequence :
MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVFPSLLLITTMFRLGINISSSR
QILLKAYAGHVIQAFGDFVVGGNYVVGFIIFLIITIIQFIVVTKGAERVAEVAARFRLDAMPGKQMAIDADLRAGMIDAQ
QARDKRGMIQKESELYGAMDGAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL
ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILSLIFGILGVILLAKKNSASKQ
GASGASTTVGAASDGAAAAGDNPDDYSLTLPVILELGKDLSKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVR
TDSPSLEGYDYMILLNEVPYVRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSAWVSEDAKAILEKAAIKYWTPLE
VIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRLVQEQISIKDLRTILESLSEWAQT
EKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTITPTPPG
GQPPVLLTAIDVRRYVRKLIETEFPDIAVISYQEILPEIRIQPLGRIQIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssD AAO18050.1 LssD Virulence TTSS locus Protein 6e-140 46
YPO0266 YP_002345347.1 secretion system apparatus protein SsaV Virulence Not named Protein 6e-94 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B602_0501 YP_006737379.1 type III secretion , HrcV family protein VFG2126 Protein 0.0 91
B602_0501 YP_006737379.1 type III secretion , HrcV family protein VFG0384 Protein 9e-140 46
B602_0501 YP_006737379.1 type III secretion , HrcV family protein VFG0064 Protein 8e-143 46
B602_0501 YP_006737379.1 type III secretion , HrcV family protein VFG0198 Protein 4e-129 46