Gene Information

Name : B602_0041 (B602_0041)
Accession : YP_006736936.1
Strain : Chlamydia psittaci M56
Genome accession: NC_018623
Putative virulence/resistance : Virulence
Product : type III secretion apparatus H+-transporting two-sector ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 44223 - 45455 bp
Length : 1233 bp
Strand : +
Note : -

DNA sequence :
ATGTTAATTAAAGCAGTCGTTCCCAATGTACGCGTTGGGGAGGTATGCTTAGTTAAACGTCATGGTATGGAGCCGCTCGT
TACTGAAGTTGTCGGCTTCACACAAAATTTTGCTTTCTTATCGCCATTAGGAGAACTTACTGGAGTCAGCCCTTCTTCAG
AGGTTATTCCAACAGGTCTACCTTTGCATATTCGTGCAGGTAACGGTCTTTTAGGTCGTGTATTAAATGGTTTAGGAGAA
CCTATCGACTCCGAAACCAAAGGACCTTTAGTTGATGTTAACGAAACCTATCCTATTTTTCGTGCCCCTCCAGATCCATT
GCATAGAGAAAAGTTAAGAACAATTTTATCCACAGGTGTGCGGTGTATCGACGGTATGCTCACAGTTGCCAGAGGTCAGC
GTATAGGAATTTTTGCTGGGGCTGGGGTTGGTAAATCGTCTCTCTTGGGAATGATCGCTAGAAACGCTGAAGAAGCGGAT
GTCAATGTGATTGCTCTCATAGGAGAGCGGGGCCGAGAGGTTCGTGAATTTATCGAGGGGGATCTTGGAGAAGAAGGAAT
GAAACGATCGGTGATCGTCGTCTCTACTTCAGATCAATCATCACAGTTGCGGTTAAATGCTGCTTATGTAGGGACTGCTA
TAGCAGAGTATTTTCGTGATCAGGGAAAAACTGTAGTTTTGATGATGGATTCTGTAACCCGATTTGCCCGAGCTCTAAGA
GAAGTAGGTTTGGCTGCCGGTGAGCCTCCAGCTCGAGCAGGATACACACCTTCTGTATTTTCAACTTTGCCTAGGTTATT
AGAACGTTCCGGAGCTTCTGATAAAGGAACAATTACAGCATTTTACACTGTACTTGTTGCCGGTGATGATATGAATGAAC
CGGTCGCTGATGAAGTTAAATCGATTCTTGATGGTCACATTGTCTTGTCTAACGCTTTAGCTCAGGCATATCACTATCCC
GCTATTGATGTTTTAGCATCAATAAGCCGACTGCTGACAGCAATTGTTCCTGAGGAACAAAGACGCATCATAGGAAAAGC
CCGAGAGGTGCTGGCAAAATATAAGGCAAACGAAATGCTTATACGTATTGGAGAATACCGCCGAGGGTCCGATCGTGAAG
TAGATTTTGCTATAGATCACATCGATAAATTGAACAGATTCTTAAAGCAAGATATTCATGAAAAAACGAATTACGAGGAA
GCCTCGCAACAACTTCGGGCTATTTTCCGATAA

Protein sequence :
MLIKAVVPNVRVGEVCLVKRHGMEPLVTEVVGFTQNFAFLSPLGELTGVSPSSEVIPTGLPLHIRAGNGLLGRVLNGLGE
PIDSETKGPLVDVNETYPIFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSLLGMIARNAEEAD
VNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALR
EVGLAAGEPPARAGYTPSVFSTLPRLLERSGASDKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYP
AIDVLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNRFLKQDIHEKTNYEE
ASQQLRAIFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-101 57
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-77 55
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-77 55
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-91 54
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-91 54
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-92 54
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-91 54
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-92 54
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-92 54
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-92 54
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-92 54
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-91 54
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-80 52
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 7e-77 50
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 4e-77 50
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-77 50
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-77 50
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-77 49
escN AAC38383.1 EscN Virulence LEE Protein 5e-79 48
escN NP_290268.1 hypothetical protein Virulence LEE Protein 4e-79 48
ECs4568 NP_312595.1 EscN Virulence LEE Protein 4e-79 48
escN AAC31513.1 L0034 Virulence LEE Protein 3e-79 48
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-79 48
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-74 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 3e-70 47
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-74 47
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 3e-75 47
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 3e-75 47
escN AAK26715.1 EscN Virulence LEE Protein 1e-78 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 8e-79 47
escN AAL57542.1 EscN Virulence LEE Protein 1e-78 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 7e-79 47
escN CAI43874.1 EscN protein Virulence LEE Protein 5e-79 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 5e-79 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-78 47
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 6e-68 46
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-69 46
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-69 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-80 46
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-81 46
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-76 46
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-76 46
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-76 45
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 2e-68 44
invC AAS66861.1 InvC Not tested SSR-2 Protein 2e-67 44
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-63 44
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-63 44
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 2e-63 44
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-63 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG2144 Protein 0.0 95
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0192 Protein 3e-107 57
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0048 Protein 3e-102 57
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0390 Protein 8e-102 56
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0515 Protein 2e-77 50
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0812 Protein 2e-79 48
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0730 Protein 3e-79 48
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG2499 Protein 2e-75 46
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG2331 Protein 3e-75 45
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG2459 Protein 1e-68 45
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG1254 Protein 4e-78 45
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG1778 Protein 1e-68 45
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0555 Protein 9e-64 44
B602_0041 YP_006736936.1 type III secretion apparatus H+-transporting two-sector ATPase VFG1008 Protein 7e-62 42