Gene Information

Name : MIP_04257 (MIP_04257)
Accession : YP_006729999.1
Strain : Mycobacterium indicus pranii MTCC 9506
Genome accession: NC_018612
Putative virulence/resistance : Unknown
Product : transposase for insertion sequence element IS986/IS6110
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3150933 - 3151895 bp
Length : 963 bp
Strand : +
Note : -

DNA sequence :
TTGATCTGTGCGTTCATCGCCGAGCATCGTGCTCGGTTCGGGGTCGCTCCGATCTGCCGCGTGCTCACTGAGCACGGCTG
CGTGATCGCCCCGAGAACCTTCTATGCCTGGCTGGCCCGCCCACCGTCGGCGCGGGCCCTGTGGGACACCGTCATTACCG
AGGTGCTGGCCGGCTACTACGAACCCGACGAGCACGGCCGGCGCAAACCGGAGTCCTTGTACGGGGCCACGAAAATGTGG
GCTCACTTGCAACGCCAGGGCATCACCGTGGCCCGCTGCACCGTGGAACGACTGATGCGCGTCAACGGCTGGCGCGGGGT
CACCCGGCGCAAAAAGGTCCGCACCACCGTGGCCGACCCGGCCGCGACCCGGGCGGCGGATCTGGTCAAACGCCAGTTCC
GGGTGCGCGCCCCCAACGTGCTGCTCGTCGCGGATTTCACCTACGTGCGCCTGGCCACCGGGGTGTTCGTCTACACCGCG
TTCGCCATTGATGCCTACGCCGGGCGGATCGTGGGCTGGACCTGCTCGGCAAGCAAGGAAGACCGGTTCGTGCGTCAGGC
GATCAGGCATGCGGCGCAACTGCGGTTCAATGAAGGCAATCCATTGATGGGCAACACTATTCACCATTCGGACGCAGGGT
CGCAATATACGTCGGTGCGGTTCGGGGAAACCTTGACCCTGTCCGGGCTGGTGGCCTCAATCGGCACTGTCGGGGACGCC
TTCGACAACGCTCTGGCCGAAACAACGATAGGGCTGTACAAGACCGAAGCCGTCCGGGCGGATTCGCCCTTCCGGCGCGG
CCCCCTGCAGCGCCTGACCGACGTGGAACTGCTCACCGCCGACTGGGTGCACTGGTACAACACCAGCCGGCTCATGCACC
GCCTGGGCCGCATCCCACCGACCGAGTACGAGACGATCTACTACGCTACGAACACAGCCCAATCAGAGGCTGCACACCCA
TAA

Protein sequence :
MICAFIAEHRARFGVAPICRVLTEHGCVIAPRTFYAWLARPPSARALWDTVITEVLAGYYEPDEHGRRKPESLYGATKMW
AHLQRQGITVARCTVERLMRVNGWRGVTRRKKVRTTVADPAATRAADLVKRQFRVRAPNVLLVADFTYVRLATGVFVYTA
FAIDAYAGRIVGWTCSASKEDRFVRQAIRHAAQLRFNEGNPLMGNTIHHSDAGSQYTSVRFGETLTLSGLVASIGTVGDA
FDNALAETTIGLYKTEAVRADSPFRRGPLQRLTDVELLTADWVHWYNTSRLMHRLGRIPPTEYETIYYATNTAQSEAAHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 7e-33 49
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 4e-33 49
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 1e-38 48
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 1e-38 44
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-39 44
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 4e-39 44
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 3e-39 44
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 7e-39 43
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 7e-39 43
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 7e-39 43
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-40 43
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-39 43
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-39 43
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 5e-40 43
Z1198 NP_286733.1 transposase Not tested TAI Protein 2e-39 43
Z1638 NP_287141.1 transposase Not tested TAI Protein 2e-39 43
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-22 43
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-39 43
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-39 43
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-39 43
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 4e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MIP_04257 YP_006729999.1 transposase for insertion sequence element IS986/IS6110 VFG1602 Protein 2e-36 42