Gene Information

Name : MIP_01788 (MIP_01788)
Accession : YP_006728317.1
Strain : Mycobacterium indicus pranii MTCC 9506
Genome accession: NC_018612
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1264712 - 1265878 bp
Length : 1167 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGACGACGGCAACCCACACCCCGAGTTCACCGGGCTGGCCACCAAAGCGATTCACGCCGGCTACCGGCCGGACCC
GGCGACCGGAGCGGTCAACGCCCCGATCTACGCCAGCAGCACCTTCGCCCAGGACGGCGTCGGCGCATTGCGGGGCGGAT
TCGAATACGCGCGCACCGGCAACCCGACCCGCGCCGCGCTGGAGGCCGCGCTGGCCGCCGTCGAGGAAGGCAGCTACGGC
CGGGCCTTCGCCTCGGGGATGGCCGCCACCGACTGCGCCCTTCGCACAGTGCTGCGGCCGGGTGACCACGTCGTGATCCC
GAATGACGCCTACGGCGGCACGTTCCGGCTGATCGACAAGGTCTTCACCCAGTGGAACGTCGACTACACGCCCGTCGCGC
TGCACGAGCTGGACGCCGTCGCCGCCGCGATCACGCCGCGCACCCGGATGATCTGGGTGGAAACCCCGACCAACCCGTTG
CTGTCCATCGCCGATATCGCCGCCATCGCCGAGCTGGGCGAGCAGCATTCCGCGAAAGTGTTGGTGGACAACACCTTTGC
CTCACCCGCGCTGCAGCAGCCGCTGACGCTGGGGGCAGACATCGTGCTGCACTCCACCACCAAGTACATCGGCGGCCATT
CCGACGTGGTGGGCGGCGCGCTGGTCACCAACGACCAGGAACTCGACGACGCGTTCGGCTTCCTGCAGAACGGGGCCGGC
GCGGTGCCCGGCCCGTTCGACGCCTACCTGACGATGCGCGGACTGAAGACCCTGGTGCTGCGCATGCAGCGGCACAGCGA
AAACGCCATGGCCGTAGCGGAATTCCTCGCGGGCCATCGCGCGGTGAGCGCGGTGCTCTACCCCGGCCTGCCCAGCCACC
CCGGGCACGAGGTCGCCGCGCGGCAGATGCGCGGGTTCGGCGGCATGGTCTCGGTGCGCATGAAAGGCGGCCGGGACGCC
GCCCGGGATCTGTGCGCCAACACCAAGGTGTTCATCCTGGCCGAATCGCTGGGCGGGGTCGAGTCGCTGATCGAGCACCC
CAGCGCGATGACGCATGCGTCGACGGCCGGGTCGCAATTGGAAGTGCCCGACGACCTGGTGCGGCTGTCGGTCGGCATCG
AGGACGTCGCCGACCTGGTGGCCGATCTGCAGCAGGCCCTCGCCTAG

Protein sequence :
MSDDGNPHPEFTGLATKAIHAGYRPDPATGAVNAPIYASSTFAQDGVGALRGGFEYARTGNPTRAALEAALAAVEEGSYG
RAFASGMAATDCALRTVLRPGDHVVIPNDAYGGTFRLIDKVFTQWNVDYTPVALHELDAVAAAITPRTRMIWVETPTNPL
LSIADIAAIAELGEQHSAKVLVDNTFASPALQQPLTLGADIVLHSTTKYIGGHSDVVGGALVTNDQELDDAFGFLQNGAG
AVPGPFDAYLTMRGLKTLVLRMQRHSENAMAVAEFLAGHRAVSAVLYPGLPSHPGHEVAARQMRGFGGMVSVRMKGGRDA
ARDLCANTKVFILAESLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLVADLQQALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-70 46
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-71 46
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 7e-52 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MIP_01788 YP_006728317.1 cystathionine gamma-synthase BAC0207 Protein 1e-59 44