Gene Information

Name : LBUCD034_1011 (LBUCD034_1011)
Accession : YP_006725637.1
Strain : Lactobacillus buchneri CD034
Genome accession: NC_018610
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1003887 - 1004639 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence : 
ATGACAACTAAAATCGTTCAAACAGAAGATTTACACAAAACCTACGATAAAGACAGCGCAAAACCATATGAAGCTCTGAA
AGGGATCAGCTTGTCGGTTAACGAGGGCGAATTTGTCGGAATCATGGGCGCGTCCGGTTCCGGAAAGACGACTTTGCTAA
ATATTTTGGCAACTCTCGATCAACCAACCAGCGGTTCGGTCGAAATTGACGGCCAAGATGTAACTCATTTAACTGCGAAC
CAGATGGCAGATTTTCGTTCTAAAAAATTGGGTTTCATCTTCCAAGACTTTAACTTATTGGAAACCTTAACCGCCCAAGA
AAATATTGCTTTGCCGTTGTCGCTTCAAAATGCCAAGGCGGCCACCATCCAAACTGCTGTCAAGGAAGCCGCCAGCAAGT
TGGGAATTGATGACTTGCTGAGTAAGTACCCAACGCAATTATCCGGTGGGCAAAAGCAACGGGTCGCCGCTGCCAGAGCC
TTAGTGTCAAATCCGTCAATTATTTTTGGGGATGAACCAACCGGAGCGCTTGACTCAACCAACGCCCGTGAATTACTGGA
CACCTTAACGAACATCAATCAACAGGGGGTCTCAATTCTCTTAGTGACCCATGACCCGTTCTCCGCTAGTTTCTGTAAAC
GAATTTTATTTATCAAAGACGGAAAAATTGGCGATGAGGTAGACGCCGGCGATAAGCCGAGAAATGAATTCTATCAGGAA
ATCCTCGAAAAACTCGGTACATTTGAACAGTAA

Protein sequence : 
MTTKIVQTEDLHKTYDKDSAKPYEALKGISLSVNEGEFVGIMGASGSGKTTLLNILATLDQPTSGSVEIDGQDVTHLTAN
QMADFRSKKLGFIFQDFNLLETLTAQENIALPLSLQNAKAATIQTAVKEAASKLGIDDLLSKYPTQLSGGQKQRVAAARA
LVSNPSIIFGDEPTGALDSTNARELLDTLTNINQQGVSILLVTHDPFSASFCKRILFIKDGKIGDEVDAGDKPRNEFYQE
ILEKLGTFEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBUCD034_1011 YP_006725637.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 7e-43 43
LBUCD034_1011 YP_006725637.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-35 43