Gene Information

Name : LBUCD034_0343 (LBUCD034_0343)
Accession : YP_006725030.1
Strain : Lactobacillus buchneri CD034
Genome accession: NC_018610
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 377168 - 377863 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGTGATTGAATTAAAAAACATTAATAAGTACTTTGGATCCGGTATTAGCAAGGTCCACGTTTTGAAGGATGTCAA
TTTTGCGGCTGATCGGGGACAGTTGATCCTAGTGGTTGGTCCCTCTGGATCAGGGAAAAGTACCTTCTTGACCATTGCGG
GTGGCCTGCAGACGCCATCCTCCGGTTCAGTGGAAGTTGAAGGTCAAGCAGTTGAGTCACTCACAAAAGCGCAGCGAGAT
CAGCTGCGGTTAAATCAAATCGGCTTTGTCCTTCAATCATATAATCTGGTGCCGTACCTGAAAGTCAAAGAACAATTTGA
GTTTGTGGATAAAATCAAGCATGAGGGTAATTTAGATCAGAAAGAATTAGCAGATTTGCTTGATCAGCTGGGCATTTCTC
AGTTGGTCAACCAGTTCCCCGGCGAACTGTCTGGGGGCCAAACTCAAAGAGTGGCGATTGCCAGAGCACTGTATGCCAAT
CCGGATATTGTGTTGGCCGATGAACCAACAGCTGCCCTTGATAGTGAAAAGGTTGCCGAGGTCGGCCGACTGTTCAAAAA
TCTCGCAGAAACCAGGAATAAGGCGGTGGTCGTGGTCACCCATGATCTCCGGTTGCTGGATTTTGCGGATAAGACTTATG
AGATTTTGGATGGGAAGATTAGTCTTAAGGATAAGGAGCATGTCACGGATCGGTAA

Protein sequence :
MSVIELKNINKYFGSGISKVHVLKDVNFAADRGQLILVVGPSGSGKSTFLTIAGGLQTPSSGSVEVEGQAVESLTKAQRD
QLRLNQIGFVLQSYNLVPYLKVKEQFEFVDKIKHEGNLDQKELADLLDQLGISQLVNQFPGELSGGQTQRVAIARALYAN
PDIVLADEPTAALDSEKVAEVGRLFKNLAETRNKAVVVVTHDLRLLDFADKTYEILDGKISLKDKEHVTDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 3e-43 46
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-44 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBUCD034_0343 YP_006725030.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-27 41