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Name : clp (LBUCD034_2142) Accession : YP_006726705.1 Strain : Lactobacillus buchneri CD034 Genome accession: NC_018610 Putative virulence/resistance : Virulence Product : chaperone protein Function : - COG functional category : - COG ID : - EC number : - Position : 2135880 - 2137922 bp Length : 2043 bp Strand : + Note : - DNA sequence : ATGAATAACGATATTTTTGGAACTAACGGTTTTGACGATATTTTCAACGACCCGTTCTTTAGGAATGCAATGTCAGATTC CAACGGCCGTCAACAGTCACGTCAACAACCCATTCAAGTTCAAGAACGCAGACCTCAACAGAAGAAAACTTTGTTAGATG AATATGGAACAGATTTAACCAAAATGGCCAAAGATGGCAAGTTGGATCCAGTCATCGGCCGTGATAAAGAAATTGAACAA ATGGAAGAAGTTCTCAGCCGTCGTACCAAGAACAATCCAGTTCTGATCGGAGATGCCGGGGTTGGTAAGACAGCCGTTGT CGAAGGTTTGGCACAAAAGATTGTCGCTGGCGATGTGTCTGAGAAGCTCCTCAACAAGAAGATCATCTCGATTGATGTTG TCTCACTTGTTCAAGGAACTGGAATCCGTGGCCAATTTGAGGAACGGATGAAGAAGTTAATCGATGACGTTTCAAAGGAT AAGAATGTAATTCTGTTTATCGATGAAATCCATCAAATTATTGGAGCCGGCTCAACTGGTGAAGGTGACAAGATGGATGC CGGAAACATTTTGAAGCCGAAGTTGGCACGTGGCGACTTCCAGTTAATTGGTGCCACAACCAGTAATGAGTACCGGGACA TTGAAAAAGACCAGGCCCTTGCTCGTCGATTCCAGCCAATCATGGTGAACGAACCAAGTGAACAAGATACGTTAACCATT ATCAAAGGCTTGGCACCGAAATATGAGAAGTTCCACCACGTTCAATACACTGCTGATGCTTTGAAGGCCGCTGTCAGCTT GAGTAACCGCTACATTCAAGACCGAATGAATCCTGACAAGGCCATCGACTTAATTGACCAAGCCGGAGCCAAAGTTGCCA TGGGCTCATCACTCACGAAAGACAAGTCCACTCTGCAGCAAGAAGCAGAACAGCTTGAAAAGGATAAAAACGCAGCTTCC AAGAAAGAAGATTTCGAGCAGGCTGCCAAGTTGCGTGACAAGCTGGACAAGGTTCAAGATCAAATCAAGAACATCGACAG CGGTACCAAAGTCACGACACCAAAGGTCACCCCTGAAGTGATTCAATCAGTTGTTGAACGGATCACTGGAGTCCCGGTAA CCGACGTCAACAAGAATGAAGTCAACCAGTTGAACAATTTGGATAAAGACCTGAAGAAAGAAGTCATCGGCCAAGATAAA GCCCTAGATGCAATTTCCGCTGCCATTCGTCGTAGCCGGGTTGGCTTTACTGAAGGTAACCGACCAATTGGCAGTTTCTT GTTTGTCGGCCCTACCGGAGTTGGTAAGACTCAAACCGCTAAGGCTCTGGCCAAAGAATTGTTTGGCACGACAAAAGCCA TGTTCAGATATGATATGTCAGAATACATGGACAAAATCAGTGCCAGCAAGTTAATCGGTTCAGCACCTGGTTATGTTGGC TATGAAGAAGGCGGCCGTCTGACCGAGCAAGTTCGTCGTCATCCATACAGCCTGATTTTGATGGATGAAATCGAAAAGGC ACACCCAGACGTCTTGAATCTATTGTTGCAAATTTTGGACGATGGTCGTTTGTCGGATGCTCAAGGTCGAACAGTTGACT TCAGCAACACCGTGATTATCATGACCAGTAATGCCGGTCAAGGTGAAGCCGATAACAAACAAAATGTCATCGACCGATTG AAGCCATACTTCAAGCTTGAGTTCTTGAACCGAATTGATGATATTATTCAATTCAACTCATTAACCAAGCCTGATCTGTT GAAGATTCTCGATTTGATGCTCAACGATTTGAACCAATTAGTCGACAAGTCACGTGGGATCCACTTCAGCGTCACTGCCG ACGCCAAGAACAAGTTGGTCGACATGGGTTACAGTAAAGAACTTGGTGCTCGTCCAATGCACAGAGTGATTACCAAAGAA ATTACAGATAAATTAACCAATAGTTATCTGCAGAATCCAGATGTCAAAGACTTCAAAGTCGTTGTTGACAAGGATGCCAT CAAGGTTGAACCAGTTGCTGCCAAGCAAGCAATTGCTTCATAA Protein sequence : MNNDIFGTNGFDDIFNDPFFRNAMSDSNGRQQSRQQPIQVQERRPQQKKTLLDEYGTDLTKMAKDGKLDPVIGRDKEIEQ MEEVLSRRTKNNPVLIGDAGVGKTAVVEGLAQKIVAGDVSEKLLNKKIISIDVVSLVQGTGIRGQFEERMKKLIDDVSKD KNVILFIDEIHQIIGAGSTGEGDKMDAGNILKPKLARGDFQLIGATTSNEYRDIEKDQALARRFQPIMVNEPSEQDTLTI IKGLAPKYEKFHHVQYTADALKAAVSLSNRYIQDRMNPDKAIDLIDQAGAKVAMGSSLTKDKSTLQQEAEQLEKDKNAAS KKEDFEQAAKLRDKLDKVQDQIKNIDSGTKVTTPKVTPEVIQSVVERITGVPVTDVNKNEVNQLNNLDKDLKKEVIGQDK ALDAISAAIRRSRVGFTEGNRPIGSFLFVGPTGVGKTQTAKALAKELFGTTKAMFRYDMSEYMDKISASKLIGSAPGYVG YEEGGRLTEQVRRHPYSLILMDEIEKAHPDVLNLLLQILDDGRLSDAQGRTVDFSNTVIIMTSNAGQGEADNKQNVIDRL KPYFKLEFLNRIDDIIQFNSLTKPDLLKILDLMLNDLNQLVDKSRGIHFSVTADAKNKLVDMGYSKELGARPMHRVITKE ITDKLTNSYLQNPDVKDFKVVVDKDAIKVEPVAAKQAIAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-132 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clp | YP_006726705.1 | chaperone protein | VFG0080 | Protein | 2e-164 | 54 |
| clp | YP_006726705.1 | chaperone protein | VFG0079 | Protein | 5e-143 | 50 |
