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Name : dape5 (LBUCD034_2016) Accession : YP_006726584.1 Strain : Lactobacillus buchneri CD034 Genome accession: NC_018610 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : - COG ID : - EC number : 3.5.1.18 Position : 2004838 - 2005983 bp Length : 1146 bp Strand : + Note : - DNA sequence : ATGGCGGTATTTTCAGAAGAACAACGGCTGCAAATTTTCAAAGATCTCATCGCGATTCAATCGGTGAACACTGATGAAGA AAAGGTCAGCGTTTATTTAAAAAATCTTTTTGAGAAACATGGCATTTCGGCCACAATTATCCCAGTCGATGAGAATCGAA CTGATCTAAAAGCAGAAATTGGGACAGGCAATCCAGTCCTCGGAGTCTCCGGGCACATGGATGTCGTTTCACCGGGAGAT ACCTCGAAGTGGACCAGTGACCCATTTACATTAACCGAGCGCGACGGCAAGCTATACGGTCGTGGTGCGGCAGATATGAA ATCCGGGTTGGCTGCAATGGTCATTGCCATGATTGAGATTCATGATCAGGGCTTGCTGAAAAAGGGTCGGATTCGGCTCA TGGCAACCATGGGCGAAGAAGTTGGCGAATTAGGTTCACGAACCTTCGCTGACGATGGCTCAATGGACGACGTTGATGCA CTGATCATCGGTGAACCATCCGGCTACCGAATCGCCTATGCCCACAAAGGGTCAATGGATATTCGCCTAACTTCAACTGG TAAAGCTGCCCATAGTTCAATGCCGGAGCATGGCTACAATGCGCTGGATCCACTGATTGATCTCCTGCACGACGCCAATC ATCAATTTAGAGCAACCGATAAAAAGAGCGCAATGTTGGGGAATCTGGCATTTGACACGACTATCTTCAAGGGCGGGGAT CAAGTCAACTCAATTCCAGCCAAAGCTGTTGCCGATATCAACGTTCGCACCATCCCAGAGTTCGACAATGACGTTGTCGA CAAACAGCTGGATCAACTCGTTAAACAGCAAAATGCCAACGGCGCCAAAATCGTCAAGGAAACTTACATGTCTCAGCCAT CAGTTGAAACGACCGGCGACAAAAAGTTGATCGGCTTGGCACAGGAAATCGGCAAACAATATGCCGAAAAAGACATCCCA AGTGGTGCCATCCCAGCTGTCACCGACGCATCGAACATGCTGCGGGATAAGCCGAAGGAATTCCCATTTATCATCTTTGG TCCAGGAAGTAACAGTGTCCACCAAGTTGATGAGTTTGTCGACAAACAGATGTACCTTAACTTTGTGGAGATTTATCAGA AGTTGTTTACGCAGTATTTGAACTAA Protein sequence : MAVFSEEQRLQIFKDLIAIQSVNTDEEKVSVYLKNLFEKHGISATIIPVDENRTDLKAEIGTGNPVLGVSGHMDVVSPGD TSKWTSDPFTLTERDGKLYGRGAADMKSGLAAMVIAMIEIHDQGLLKKGRIRLMATMGEEVGELGSRTFADDGSMDDVDA LIIGEPSGYRIAYAHKGSMDIRLTSTGKAAHSSMPEHGYNALDPLIDLLHDANHQFRATDKKSAMLGNLAFDTTIFKGGD QVNSIPAKAVADINVRTIPEFDNDVVDKQLDQLVKQQNANGAKIVKETYMSQPSVETTGDKKLIGLAQEIGKQYAEKDIP SGAIPAVTDASNMLRDKPKEFPFIIFGPGSNSVHQVDEFVDKQMYLNFVEIYQKLFTQYLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 3e-75 | 47 |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 4e-75 | 47 |
