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Name : serS (LBUCD034_1819) Accession : YP_006726395.1 Strain : Lactobacillus buchneri CD034 Genome accession: NC_018610 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 1788482 - 1789765 bp Length : 1284 bp Strand : - Note : - DNA sequence : ATGTTAGATATTAAGAAAATCAGAAAAGATCCAGATTTTACCAAAGAAAAGCTCGCTACGCGGGGAATCAAGCCCGAAAC CATTGATGAATTAGTGGGCTACGATGCCAAACGTCGGGATCTGATCGTTGAATCAGAGTCACTTAAAGCAAAACGGAACG CCGTTTCTGACCAGATTTCACAAAAGAAGCGCAATAAAGAGGATGCAACAGAGGCCATCAACCAAATGAAACAGGTGGGC CAACGGATTAAGGAACTTGACGAGCAATTGCGGCAAGTTGAGGAAGATGAACACAATTTGGCTGCCCATCTACCAAATAT TCCACATGATGATGTCCCGGTGTCACTCACAGAAGAAGGATCCGTTGAGCTTCGTAAGATTGGGCAGATCCCGTCATTTG ATTTTGAACCAAAACACCATTGGGAAATCGGTGAAAATCTTGGCATTCTTGACTTTGAACGGGCTGCCAAAGTGTCCGGC AGCCGATTTGTTTACTATATTGGCGACGGGGCTTTATTGGAGCGGGCCGTTTACAACTTCTACCTCGACCAAAATACCGC TGCCGGTTATACCGAAGTAATTCCACCTTACATGGTTAATAACGATTCAATGTATGGCACCGGGCAATTTCCAAAATTTT TGGAGAACAAATCCGGCTATGAGATTCAGGACAGTGATTTAACCCTGATTCCAACTGCCGAAGTTCCATTGGTTAACTAT TATCGCAATGAAGTTATTCCGACAGAAAAGCTGCCGGTATCGGTTACGGCCTTGTCGCCAGCATTCCGATCGGAAGCAGG AAGTGCGGGCCGTGATACCAAGGGGCTGATTCGATTACACCAATTTAACAAGGTTGAAATGGTGAAATTTACCAAGCCCG AAGACTCGTGGAAGGCACTGGAAGAGATTACCCACCAAGCAGAAGTTAACCTGCAAAAACTTGGGTTGGCTTACCACGTT ATTACATTGACGACCAGTGATATGAGTTTCACAGCCGCTATGACACACGACCTGGAAGTTTGGTTCCCAGCCCAGGATAA GTACCGGGAAATCTCCAGCTGTTCAAACTGTACAGACTTCCAAGCACGCCGAGCACACATCCAGTATCGGGATGATGAAG GGAAACTTCACTTTGTTCATACTTTAAATGGTTCTGGACTGGCAGTCGGCAGAACGGTGGCCGCCATTCTGGAAAATTAC CAGAATGAAGATGGCACTGTCACGATCCCAGAAGTATTACGGCCATATATGCACGGCATGACTAAAATTGAAAAGCAAAA CTAG Protein sequence : MLDIKKIRKDPDFTKEKLATRGIKPETIDELVGYDAKRRDLIVESESLKAKRNAVSDQISQKKRNKEDATEAINQMKQVG QRIKELDEQLRQVEEDEHNLAAHLPNIPHDDVPVSLTEEGSVELRKIGQIPSFDFEPKHHWEIGENLGILDFERAAKVSG SRFVYYIGDGALLERAVYNFYLDQNTAAGYTEVIPPYMVNNDSMYGTGQFPKFLENKSGYEIQDSDLTLIPTAEVPLVNY YRNEVIPTEKLPVSVTALSPAFRSEAGSAGRDTKGLIRLHQFNKVEMVKFTKPEDSWKALEEITHQAEVNLQKLGLAYHV ITLTTSDMSFTAAMTHDLEVWFPAQDKYREISSCSNCTDFQARRAHIQYRDDEGKLHFVHTLNGSGLAVGRTVAAILENY QNEDGTVTIPEVLRPYMHGMTKIEKQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-128 | 62 |
