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Name : clpA (LBUCD034_1695) Accession : YP_006726288.1 Strain : Lactobacillus buchneri CD034 Genome accession: NC_018610 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpA Function : - COG functional category : - COG ID : - EC number : - Position : 1686716 - 1688977 bp Length : 2262 bp Strand : + Note : - DNA sequence : ATGCTATGTCAAAATTGCCATAAGAACCCAGCAACGATTCACTTGTACACTAATGTGAATGGGCAAAAGCAAACTATTAA CCTTTGCCAAAATTGCTATCAACTCCTATCCAATCAACAACGTAATACAGGAGGTGCTCAAAATATGGCTCAAGATCCAT TTGGTTTTGGTGGATTAGATGACATTTTCCGTGCAATGCAAGGCGGAAACGTTGATCCAACCAATGGTCAACAAGTGCCA CCAACCCAACCAATGGGACCCAACAATGGCGGCCCCAACCGACCAAGAACCGGCGGAGCGGGCGGAAATTCCCTGCTTGG TCAATACGGAATTAATTTGACCCAGCTTGCCAAAGATGGCAAAGTTGACCCGGTTATCGGTCGTGACAATGAAATTCAAC GGGTAATTGAAATCCTGAACCGCCGGACAAAGAATAACCCCGTCCTTATTGGGGAAGCCGGTGTTGGTAAAACTGCTGTC GTTGAAGGACTTGCTCAAGAAATTGTTTCCGGCAACGTTCCTTCAAAGCTTCAGAATAAGCAAATTATTCGTCTTGACGT GGTTTCTTTGGTTCAAGGAACCGGAATCCGTGGTCAATTTGAACAAAGAATGCAGCAGTTAATTAAAGAAGTTCAAGATA ATCCCGACATCATCCTGTTCATTGATGAAATTCATGAAATTGTTGGTGCCGGTAACGCTGAAGGTGGTATGGATGCCGGA AACGTTTTGAAGCCAGCATTGGCTCGAGGCGAGTTCCAGTTGATCGGTGCCACTACTTTAAAGGAATACCGTGATATCGA AAAGGACTCTGCTTTGGCTCGTCGTTTGCAGCCGGTAACGGTTGATGAACCAAGCCCCGAAGAATCTATTAAGATTTTGA AAGGTATCCAAAAGCGTTATGAAGATTACCACCACGTTAAGTACACCGATGACGCGATTGAAGCGGCCGTTAAGCTGTCA GACCGTTACATTCAGGATCGATTCTTACCTGATAAAGCCATCGACTTACTTGATGAAGCCGGATCACGAAAGAATTTGAC CATCAATGCCGTTGATCCACACACGGTCGATGAAAAAATTCAAAGTGCCGAAAAGCAAAAGCAAGCTGCGTTGAAGAGTG AAGACTACGAAAAAGCTGCTTACTACCGTGATCAAGTTACCAAGCTTGAAAATGCCAAGAAGAACGGCAGTGTCGACTCG GCAGCAACACCAAAGGTCACTGCTCAAGACATGGAAAAGATTGTCGAAGAGAAGACTGAAATTCCGGTTGGTGAACTTCA AACCAAGGAACAACAACAACTTCGTAATTTGGCCCCTAACCTTGAAAAACACGTTATCGGACAAAACGAAGCGGTTGAAA AAGTTGCTCGGGCAATTCGTCGTAATCGGGTTGGCTTCAACGGTACCGGCCGACCAATTGGTTCATTCCTGTTTGTCGGA CCTACCGGTGTTGGTAAAACTGAAATGGCTAAGCAGCTGGCCTATGAACTGTTTGGTTCAAAGGATTCGATGATCCGGTT TGACATGTCTGAGTACATGGAGCCGCATTCAGTGGCTAAGTTGATCGGTTCACCTCCTGGCTACGTTGGGTACGAAGAAG CCGGTCAGTTGACTGAACAGGTTCGTCGTCACCCATACTCATTGATTTTACTCGATGAAGTTGAAAAAGCTCACCCAGAT GTTCTTCATATGTTCCTGCAGATTCTTGACGATGGTCGTTTGACTGATAGTCAGGGACGAACAGTTTCATTTAAGGATAC CATCATTATCATGACCAGTAACGCCGGTCAGGGTAATGCGGAAGCCAACGTTGGTTTCGGTGCTGCAGCCAGTGGGAAGA CCCATTCAATTATTGATAAGTTGACCGACTACTTCAAGCCCGAATTGTTGAACCGTTTCGATGACATTGTTGAGTTCCAC TCATTATCAAAGGACAACCTGATGAAGATTGTTTCCTTGATGATTGACGATGTCAACGGTATGCTTAAGCAACAAGGATT GAAGATCAACGTGACTGACAAGGCCAAGGCCAAATTGGTTGACTTGGGCTACAATCCAGCTATGGGAGCTCGTCCACTTC GAAGAGTTATCCAAGAGCAGATTGAAGACAAGGTTGCCGACTTCTACTTGGATCACGAAAATGCTGCTACATTAACAGCT GACGTAGATTCAAAGGGCAACATTGTTATCAAGAGCGACAGCGCGGCTGAAGTAAAAGCTTCAACCAAAGCAAAGCCTGA TAGCAAGGATTCAGATAAATAA Protein sequence : MLCQNCHKNPATIHLYTNVNGQKQTINLCQNCYQLLSNQQRNTGGAQNMAQDPFGFGGLDDIFRAMQGGNVDPTNGQQVP PTQPMGPNNGGPNRPRTGGAGGNSLLGQYGINLTQLAKDGKVDPVIGRDNEIQRVIEILNRRTKNNPVLIGEAGVGKTAV VEGLAQEIVSGNVPSKLQNKQIIRLDVVSLVQGTGIRGQFEQRMQQLIKEVQDNPDIILFIDEIHEIVGAGNAEGGMDAG NVLKPALARGEFQLIGATTLKEYRDIEKDSALARRLQPVTVDEPSPEESIKILKGIQKRYEDYHHVKYTDDAIEAAVKLS DRYIQDRFLPDKAIDLLDEAGSRKNLTINAVDPHTVDEKIQSAEKQKQAALKSEDYEKAAYYRDQVTKLENAKKNGSVDS AATPKVTAQDMEKIVEEKTEIPVGELQTKEQQQLRNLAPNLEKHVIGQNEAVEKVARAIRRNRVGFNGTGRPIGSFLFVG PTGVGKTEMAKQLAYELFGSKDSMIRFDMSEYMEPHSVAKLIGSPPGYVGYEEAGQLTEQVRRHPYSLILLDEVEKAHPD VLHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGQGNAEANVGFGAAASGKTHSIIDKLTDYFKPELLNRFDDIVEFH SLSKDNLMKIVSLMIDDVNGMLKQQGLKINVTDKAKAKLVDLGYNPAMGARPLRRVIQEQIEDKVADFYLDHENAATLTA DVDSKGNIVIKSDSAAEVKASTKAKPDSKDSDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-155 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA | YP_006726288.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | VFG0080 | Protein | 0.0 | 58 |
| clpA | YP_006726288.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | VFG0079 | Protein | 2e-155 | 51 |
