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Name : lysS (LBUCD034_1617) Accession : YP_006726215.1 Strain : Lactobacillus buchneri CD034 Genome accession: NC_018610 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1597834 - 1599339 bp Length : 1506 bp Strand : - Note : - DNA sequence : GTGGCCAAAGACAAAGAAATGAATGACCAAATGATCGTCCGTCGCCAGAAGATGGACGAATTACGCAAGGAAGGAATCGA TCCATTTGGACATCGATTCGTGCGTACATATCTTGCTGAACAACTGCATCATGATTTTGATGATGAAGATAAAGATGAAT TAATGGAAAAGGACAAGAAAGTTACCATTGCCGGCAGAATGATTGCTAAGCGGGGTAAAGGTAAGGTCGGTTTTGCCGAT TTAAAGGATCGAACTGGAAAAATCCAGATATATGTTCGTAAGGATATTGTCGGCGATGACATTTACCATATTTTTAAACG ATCCGACATTGGTGATCACCTCGGAATTTCCGGCCAAATTATCAAAACAGACATGGGTGAACTGACTGTTCGTGCAGAGT CAGTTACTTTCCTGTCAAAGGCGCTGCGGCCGCTACCAGATAAATTTCATGGCTTAAAGGACAAGGAACAGCGTTATCGT CAGCGCTACCTTGATCTCATTTCCAACCAGGACAGCTTCGATCGTTTTGTTAAGCGCACGAAGATTGTTTCTGCTGTCCG CAAGTATCTGGATTCAAACGATTATCAAGAAGTAGAAACCCCAGTTCTGCATAATTCTGCGGGTGGTGCGAATGCCCGTC CCTTTATTACCCATCACAATGCTTTGAATATCGACTTGTATTTAAGAATTGCGCTTGAACTGCATTTGAAGCGATTGATT GTGGGTGGACTGGAACGAGTTTACGAAATTGGCCGGGTCTTCAGAAATGAAGGAATGGATACCCGTCATAATCCGGAGTT CACAATGCTTGAATCCTATGTTGCCTATTATGACTTCCATGATGTGATGGATGAAACAGAGGGCATCTTTAAGGCAGCAG CAGCTGCTGTTACGGATGATAATGTTGTGACTTATCAAGGCCACACCGTTGACTTGAACAAACCGTTTAAACGACAGCAT ATGGTTGATGCAATTAAGGAATATACCGGAATTGATTTCTGGCAACCAATGTCTGATGATGACGCTAAAAAATTGGCTGA TGAACACCATATTCATTACGAACCATGGTGGAAGACCGGCCATATTATTAATGCATTTTTTGAGGAGCTCGTTCAACCTA AGCTGGAGCAGCCAACATTTATTTATGGGCATCCGGTTGAGATTTCACCACTGGCCAAGAAGAACCATGATGATCCAAGA TTTACCGATCGTTTTGAGTTATATATTTTAACTAACGAATTCGCCAATGCATTTTCCGAACTGAATGACCCAATTGATCA GCGTCAACGATTTGAGGCTCAAGTTGCTGAACGTAAAGCTGGTAACGAAGAGGCTGAAGGAATTGATGAAGACTACATTG AAGCCCTTGAGTATGGTATGCCGCCAACGGGTGGACTTGGAATCGGCATTGATCGACTGGTTATGTTATTGACCGATGCA CCATCCATTCGTGACGTGATTCTGTTCCCAACGATGCGCCCCGAGGATAATACGAATAACGATTAA Protein sequence : MAKDKEMNDQMIVRRQKMDELRKEGIDPFGHRFVRTYLAEQLHHDFDDEDKDELMEKDKKVTIAGRMIAKRGKGKVGFAD LKDRTGKIQIYVRKDIVGDDIYHIFKRSDIGDHLGISGQIIKTDMGELTVRAESVTFLSKALRPLPDKFHGLKDKEQRYR QRYLDLISNQDSFDRFVKRTKIVSAVRKYLDSNDYQEVETPVLHNSAGGANARPFITHHNALNIDLYLRIALELHLKRLI VGGLERVYEIGRVFRNEGMDTRHNPEFTMLESYVAYYDFHDVMDETEGIFKAAAAAVTDDNVVTYQGHTVDLNKPFKRQH MVDAIKEYTGIDFWQPMSDDDAKKLADEHHIHYEPWWKTGHIINAFFEELVQPKLEQPTFIYGHPVEISPLAKKNHDDPR FTDRFELYILTNEFANAFSELNDPIDQRQRFEAQVAERKAGNEEAEGIDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDA PSIRDVILFPTMRPEDNTNND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-111 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006726215.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 8e-112 | 47 |
