Gene Information

Name : smpB (LBUCD034_1439)
Accession : YP_006726051.1
Strain : Lactobacillus buchneri CD034
Genome accession: NC_018610
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1426578 - 1427051 bp
Length : 474 bp
Strand : -
Note : -

DNA sequence :
ATGGCCAAAGGCAAAAAGCAGCATAATAACGATAATTTGATGGCGCAAAATAAAAAAGCCCGTCATGATTATTCGATTTC
AGAAACCTACGAAGCTGGAATTGTGCTGACAGGTACCGAAATTAAATCGATTCGTGCTCGGCGGATTAACCTAAAGGACG
GCTTCGTTCAAATTCGAAACGATGAGGCCTACATGATGAACGTCCACATCAGTGAGTACGCTGAGGGGAACCAATTTAAT
CATGACCCGCTGCGCAATCGAAAGTTGTTGCTGCACAAAAAGCAAATTCGCAAATTGGCTCAAATTACTCAAGACAAAGG
GGTTACAATCGTTCCTTTAAAGGTCTACCTCAAAAATGGTTTTGCCAAAGTTTTAATTGGGGTAGCAACTGGTAAGCATG
AGTACGATAAGCGTGAAACCATCAAGCGACGTGATCAAAAGCGTCAAATTGAACGAGTTATGAAACATTATTAA

Protein sequence :
MAKGKKQHNNDNLMAQNKKARHDYSISETYEAGIVLTGTEIKSIRARRINLKDGFVQIRNDEAYMMNVHISEYAEGNQFN
HDPLRNRKLLLHKKQIRKLAQITQDKGVTIVPLKVYLKNGFAKVLIGVATGKHEYDKRETIKRRDQKRQIERVMKHY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-39 60
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 7e-29 43