Gene Information

Name : rplS (LBUCD034_1247)
Accession : YP_006725869.1
Strain : Lactobacillus buchneri CD034
Genome accession: NC_018610
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1245521 - 1245883 bp
Length : 363 bp
Strand : -
Note : -

DNA sequence :
ATGCGACAAAATCAATTGATTGACAAGATCAACGCGAAGCAACTACGTAATGACATTCCTGATTTCCGTGCCGGAGATTC
TGTAAGAGTTTACGTTAAGGTTGTTGAAGGTACCAGAGAACGTATTCAGTTGTTCGAAGGTGTTGTTATCAAACGCAAGG
GTTCAGGCATTCAAGCCACTTATACCGTTCGTAAAGTAAGTAACGGTGTTGGGGTTGAACGAATTTTCCCACTTCATTCA
CCACGAGTTGATAAAATCGAAGTAGTAAGACAAGGTCACGTTCGTCGTGCCAAGCTTTACTACCTGCGTGACTTACAAGG
TAAGGCTGCTCGTATTCGAGCTTCCCTTCGTTCACGTGGATAA

Protein sequence :
MRQNQLIDKINAKQLRNDIPDFRAGDSVRVYVKVVEGTRERIQLFEGVVIKRKGSGIQATYTVRKVSNGVGVERIFPLHS
PRVDKIEVVRQGHVRRAKLYYLRDLQGKAARIRASLRSRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 5e-37 71
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 2e-26 54