Gene Information

Name : LBUCD034_1166 (LBUCD034_1166)
Accession : YP_006725789.1
Strain : Lactobacillus buchneri CD034
Genome accession: NC_018610
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1159878 - 1160768 bp
Length : 891 bp
Strand : +
Note : -

DNA sequence :
ATGATGCACGAACAAATTGAGGACTATCTTCATTATTTACGGGTCGAACGCGGCCTTTCAGATAATACGATTAAAAGTTA
TCGGCAGGATCTGCAGGAGGCCGGTGCTTTTTTTGACAAACACGCCAAATCAATTGCCGACATTGACCAATTTGTCATCT
TGGATTATTTAGAAACTCTTCAACGGCAGCATAAAGCCCGGAACACGGTTATCAGGGTGGTCTCGACATTACGGCGGTTC
TTCCAGTACTTGGTTCAATTCCACGTGATTGTTGACGATCCGATGCTCAAGGTTGATTCGCCTAAAAAGGCCCAGACACT
GCCGGACGTTTTAACTGTGGCCCAAGTTAATCAGTTACTATCGATGCCGGATACTCATAAAAAATTAGGTCTGCGCGATC
GCGCAATCCTAGAGACGCTGTATGCCACCGGCCTGCGGGTCAGTGAACTGGTTAACTTGAAGTTGGGTGACCTGCATTTG
CCGATGAACTTGCTGCAGACAATTGGGAAGGGCGACAAAGAGCGGATCATTCCCATCAGCGACGTGGCAATCGACTGGTT
GAATCAATACATCCAATCGACGCGAGTCCAACTACTTTCGGGAAGGCCCAACTCCGAGTTCCTATTTTTAAATGCCCACG
GTCACCAACTGACCCGCCAGGCAATCTGGCAGATGATTAAAAAATATGTCAACCAGGCCGGCATCAAACGCCATGTCACA
CCACATACACTGCGGCATTCATTTGCGACCCACCTGCTTGAAAACGGGGCCGACTTAAGAATCGTTCAGGAACTGTTGGG
GCATTCCGATATTTCGACGACTCAAATCTACACCCACGTTTCTCATAAGCATTTAACGGAAGTTTATAATAAATATCATC
CGCGAGCATAA

Protein sequence :
MMHEQIEDYLHYLRVERGLSDNTIKSYRQDLQEAGAFFDKHAKSIADIDQFVILDYLETLQRQHKARNTVIRVVSTLRRF
FQYLVQFHVIVDDPMLKVDSPKKAQTLPDVLTVAQVNQLLSMPDTHKKLGLRDRAILETLYATGLRVSELVNLKLGDLHL
PMNLLQTIGKGDKERIIPISDVAIDWLNQYIQSTRVQLLSGRPNSEFLFLNAHGHQLTRQAIWQMIKKYVNQAGIKRHVT
PHTLRHSFATHLLENGADLRIVQELLGHSDISTTQIYTHVSHKHLTEVYNKYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 7e-55 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 7e-55 42