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Name : B739_1835 (B739_1835) Accession : YP_006724319.1 Strain : Riemerella anatipestifer RA-CH-1 Genome accession: NC_018609 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1914602 - 1916299 bp Length : 1698 bp Strand : + Note : - DNA sequence : ATGCATTTATCAGAACAAGAAATTATCCGTAGAGAAAAGTTAGAAAAACTTTCTCAAATGGGCATAAATGCCTTTCCGGC AGACGAATATGCTATTACACATACTACACAATCTATAAAAGAAAATTTTCAAGAGGGAAGCAAGGTTAAAATCGCTGGTA GGCTAATGTCTAGAAGAATCCAGGGGAAAGCCTCTTTTGCCGAATTACAAGATAGCGAAGGCAGAATACAAGTGTATTTT AATAGAGATGAAATTTGTCCTGACGAAGACAAAACGCTTTATAACGAAGTTTATAAGCATCTTTTAGACATTGGAGATAT TATAGGTGTAGAGGGAGAATTGTTCAAAACTCAAGTAGGAGAAATGACAGTAATGGTTAAAAATTTCACTCTATTAACCA AAACGCTTCGTCCACTTCCTCAACCTAGAACTGATGAAAATGGTGTGGTACACGATGCTTTTAACGACCCTGAACTCCGT TATAGACAGCGTTATGTGGATCTTACAGTAAACCCACATGTTAAAGAAATTTTTGTAAAAAGAAGCAAGCTGTTTAATGC AATGCGTGGGTTCTTTAATGACGCCGGATATTTTGAGGTAGAAACGCCTATTTTACAAGCCATTCCAGGTGGAGCTTCAG CAAGACCATTCATTACGCATCATAATGCTTTGGATATTCCACTATATATGAGAATTGCTAACGAGCTTTATCTTAAAAGA CTTATCGTAGGTGGATTTGATGGTGTGTATGAGTTCTCTAAAAACTTCCGTAACGAAGGTATGGACCGAACTCACAACCC TGAGTTTACAGCCATGGAGATTTATGTGGCGTACAAGGATTACAACTGGATGATGGATTTTACCGAAAGACTGTTGGAAC ATTGCGCTACTGCGGTAAACGGCAAACCGGAATCTCAGTTTGGCGAACATACTATCAATTGGAAAGCCCCTTATCCAAGA ATTTCTATGACGGAAGCCATTCAGAAATTTACAGGGTTTGATATTACAGGAAAAACCGAAGAGGAACTTAGAACCTTTGC TAAATCCATCGGTATTGAAGTAGATGACACGATGGGGAAAGGCAAGCTCATTGATGAAATTTTTGGAGAGAAGTGTGAAG GTAATTTCATTCAGCCTACTTTCATTACTGACTACCCTATCGAAATGTCGCCACTTACTAAAAAGCACAGAAGTAAAGAA GGCTTAACCGAAAGATTTGAGTTGATGGTTTGTGGAAAAGAAATTGCCAATGCTTACTCTGAGCTTAACGACCCTATCGA CCAAAGAGAACGCTTTGAAGAGCAGCTTAAACTTTCAGAAAAGGGTGATGACGAAGCGATGTTTATCGACCAAGATTTCC TAAGAGCTTTAGAGTACGGTATGCCACCTACGGCTGGTTTGGGTATTGGTATGGATAGATTGGTGATGTTCTTGACGAAT AATGCTTCTATTCAGGAGGTACTATTCTTCCCTCAAATGAGACCAGAAAAAGCTCAACCTAAAGTGGAGATAGGAGAAAA CGAAGAAATTATCCTTGGTATTCTTAATAAAAACAACGGTAAAATGCTGATAGCTGATTTAAAGACTCAATCAGGCTTAA GTGGAAAGAAATGGGATAAATATTCTAAACTATTAGTTTCTAATAATTTAATTTCTCTAGTAACTGAAGGTGAGGATAAA TATTTCCAAATAGTTTAA Protein sequence : MHLSEQEIIRREKLEKLSQMGINAFPADEYAITHTTQSIKENFQEGSKVKIAGRLMSRRIQGKASFAELQDSEGRIQVYF NRDEICPDEDKTLYNEVYKHLLDIGDIIGVEGELFKTQVGEMTVMVKNFTLLTKTLRPLPQPRTDENGVVHDAFNDPELR YRQRYVDLTVNPHVKEIFVKRSKLFNAMRGFFNDAGYFEVETPILQAIPGGASARPFITHHNALDIPLYMRIANELYLKR LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERLLEHCATAVNGKPESQFGEHTINWKAPYPR ISMTEAIQKFTGFDITGKTEEELRTFAKSIGIEVDDTMGKGKLIDEIFGEKCEGNFIQPTFITDYPIEMSPLTKKHRSKE GLTERFELMVCGKEIANAYSELNDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGMDRLVMFLTN NASIQEVLFFPQMRPEKAQPKVEIGENEEIILGILNKNNGKMLIADLKTQSGLSGKKWDKYSKLLVSNNLISLVTEGEDK YFQIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-102 | 45 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-81 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| B739_1835 | YP_006724319.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-102 | 45 |
